| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026375
Identifier: 124026375
GI number: 124026375
Start: 1360991
End: 1361815
Strand: Reverse
Name: 124026375
Synonym: NATL1_16691
Alternate gene names: NA
Gene position: 1361815-1360991 (Counterclockwise)
Preceding gene: 124026376
Following gene: 124026372
Centisome position: 73.03
GC content: 29.7
Gene sequence:
>825_bases ATGGTTTCAAGAAGATTGACCAAGACACAAAAGACTGAAATCCTAGAAGCTTATAGGTCTGGAGATAATACCAATGCCTT AGCAGAAAAATATCATTGCACTCCAAATACTATAAATAGAACAGTCAAAACCCTTTTGACTGAGAGTGAATATACACTTT TAAAGAAAAAAAGATCAAAGATCATCAATAAAAAAGAGAAATTGGTTGAGAATGAAAAGGTAAAACAAAAAAATGATGAT TTAGAAAAGGAAAGTTTATTAATTTCATTTAAAGAAAAAGTTAAAGAAGAAGATCAATATTTAAAGGTAAATGAGGAATA TCATAGACTTGGTGTTGATGAAATTACTTCTTTAGATCCTGAGGATGCTGATGAATTTGTAGAAGATCAATATTCCGTTA TTCAAAAAAGTAAAGATTATAATAAGGATATAAATAATCTAAACTTTGATGATAATTTCGAGGAAATAGCCCCCCTTGTT TCTGGTTTTGATTTTGACCTACAGAAGCAAAAATCGGATTTTGAGATACTTGATTATGAATGTCTTCCAGAGAGCGTTTA TATGATTGTTGATAAGAAAGTCGAACTAGAGTTACAACTTATTTCTGATTTACCAGAATGGAGCTTTCTGCCAGAAAATG AATTGCAAAGAAAAGCAATTTTATTATTTTCTAATCAACGTTCAGCAAAAAGAATATGTTCTAGAAGTCAGAGAGTTATT AAGATCCCGAACACAAGCGTTTTTAAACTATCACAGTCATATTTAATCTCAAAGGGAATCACTAGATTAATTCTTGAAGA TTCAATAATAGGATTGGATAATTAG
Upstream 100 bases:
>100_bases TTTAGCTTTCTAAATTTTTGTAGGAGTTTTTATAGGTTGAGAATTTTTTTTACTACTTCTTATGATTAAGTCTTATCTTG TATGTATAGAAATAATAGAG
Downstream 100 bases:
>100_bases TCATTGTAAAAATTTTATCTTGGTTTAATTTTTTTGATTATTTTTAATAATTAATACTGAAGTTAGGCCTCCAGAAATTA ATCCTAAAGTAAATGATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MVSRRLTKTQKTEILEAYRSGDNTNALAEKYHCTPNTINRTVKTLLTESEYTLLKKKRSKIINKKEKLVENEKVKQKNDD LEKESLLISFKEKVKEEDQYLKVNEEYHRLGVDEITSLDPEDADEFVEDQYSVIQKSKDYNKDINNLNFDDNFEEIAPLV SGFDFDLQKQKSDFEILDYECLPESVYMIVDKKVELELQLISDLPEWSFLPENELQRKAILLFSNQRSAKRICSRSQRVI KIPNTSVFKLSQSYLISKGITRLILEDSIIGLDN
Sequences:
>Translated_274_residues MVSRRLTKTQKTEILEAYRSGDNTNALAEKYHCTPNTINRTVKTLLTESEYTLLKKKRSKIINKKEKLVENEKVKQKNDD LEKESLLISFKEKVKEEDQYLKVNEEYHRLGVDEITSLDPEDADEFVEDQYSVIQKSKDYNKDINNLNFDDNFEEIAPLV SGFDFDLQKQKSDFEILDYECLPESVYMIVDKKVELELQLISDLPEWSFLPENELQRKAILLFSNQRSAKRICSRSQRVI KIPNTSVFKLSQSYLISKGITRLILEDSIIGLDN >Mature_274_residues MVSRRLTKTQKTEILEAYRSGDNTNALAEKYHCTPNTINRTVKTLLTESEYTLLKKKRSKIINKKEKLVENEKVKQKNDD LEKESLLISFKEKVKEEDQYLKVNEEYHRLGVDEITSLDPEDADEFVEDQYSVIQKSKDYNKDINNLNFDDNFEEIAPLV SGFDFDLQKQKSDFEILDYECLPESVYMIVDKKVELELQLISDLPEWSFLPENELQRKAILLFSNQRSAKRICSRSQRVI KIPNTSVFKLSQSYLISKGITRLILEDSIIGLDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32034; Mature: 32034
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRRLTKTQKTEILEAYRSGDNTNALAEKYHCTPNTINRTVKTLLTESEYTLLKKKRSK CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH IINKKEKLVENEKVKQKNDDLEKESLLISFKEKVKEEDQYLKVNEEYHRLGVDEITSLDP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHEEECHHHHHCCHHHHHCCCC EDADEFVEDQYSVIQKSKDYNKDINNLNFDDNFEEIAPLVSGFDFDLQKQKSDFEILDYE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCEEECHH CLPESVYMIVDKKVELELQLISDLPEWSFLPENELQRKAILLFSNQRSAKRICSRSQRVI HCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHEEEEEECCCHHHHHHHHCCCCEE KIPNTSVFKLSQSYLISKGITRLILEDSIIGLDN ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVSRRLTKTQKTEILEAYRSGDNTNALAEKYHCTPNTINRTVKTLLTESEYTLLKKKRSK CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH IINKKEKLVENEKVKQKNDDLEKESLLISFKEKVKEEDQYLKVNEEYHRLGVDEITSLDP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHEEECHHHHHCCHHHHHCCCC EDADEFVEDQYSVIQKSKDYNKDINNLNFDDNFEEIAPLVSGFDFDLQKQKSDFEILDYE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCEEECHH CLPESVYMIVDKKVELELQLISDLPEWSFLPENELQRKAILLFSNQRSAKRICSRSQRVI HCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHEEEEEECCCHHHHHHHHCCCCEE KIPNTSVFKLSQSYLISKGITRLILEDSIIGLDN ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA