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The map label for this gene is 124026327

Identifier: 124026327

GI number: 124026327

Start: 1324436

End: 1325683

Strand: Reverse

Name: 124026327

Synonym: NATL1_16211

Alternate gene names: NA

Gene position: 1325683-1324436 (Counterclockwise)

Preceding gene: 124026328

Following gene: 124026324

Centisome position: 71.09

GC content: 42.63

Gene sequence:

>1248_bases
ATGAAGCTTTTTCAGCGTTTGCTGGTAGCTCCTGCTGCTTTGGGCCTAATGGCACCATTAGCTGCAAATGCCGACGTTAC
TGCGGTATCTAACGATTCAGATCTAAGTTCTGAAGTTATTCAAGCTCGTGTTGACGGCGTTGAAGCTCAACTCGGCGAAA
TAATGGCTGGTCAGTTCTCTTCATCTACAAAGATGAGCGGAAAGGCTGCTTTCATAACTGGTTATGTTGACGATGATGCT
GAGTCAGATACTGACAGCATCACTATGGAATATATGTATCAGTTGAACATGAACACCAGTTTTACTGGTGAAGACATGCT
CTACACAAGACTTAAAGCTGGTAACGTTTCTGATCATTTTGTAGATAAAGGTCAAGGTACTTATCTTTCAGCTGGTAAAA
ACACATCAGATTCTCTGACAGTTGACAAGATTTGGTATCAATTCCCAGTTGGCGATGACGTAACTGTTTGGGTTGGTCCA
AAAATTGAGAACTACTACATGCTTGCAAGTTCTCCTTCTATTTATAAGCCTGTAACTAAGCAATTCTCTCTTGGTGGAAA
CGGAACTGTTTATGGTTCCTCTACTAAAGCTGGTTTTGGCGCCGCTTATGTACAACCAACGGAAGATCCTTCAGCCGGTA
GATTTGCAGTAAGTGTTGCTTACACAAACCAAAGTGGTGCAAAGTCTGGCAAGGATCAAGGTCTATTTGGTGAAGATGGT
AAGTCAGCTTTGCTTACTAAGCTTGAGTACGGAACACCTCAGTGGCAAGTATCTGGTGCTGTTGCTTTAAAGGAAAATGG
CTGGTCTGATAGCTATTTCACAACAGCCGCAGGTAAGGCAAGGTCAGCTGCTGGTTCTGAAACTGCAGTTGGTTTAAGAG
CATATTGGAGACCTGATACAACAGGAGCTATTCCTGAAGTACAGCTTGGTTATGACGTTTCTACTATTGACGATGCACCA
ACTGGTTTTGCTGATGAAGCATCAGGTTGGATGGTTGGACTTGGTTGGAAAGATCTACTAATCGACGGAAACAGAGCTGG
TGTTGCTTTCGGTTCAAGAGTTAGCGCTACTTCTATTGTTGGTGGTACATCTGATCCTTCTGAGGATAACAGTGTTTGGG
AAGCTTACTATTCCTTCAAAATTAATGATGGCGTAACAGTTACTCCTGCAATCTTTGGTGGTTCAGATGTTGAGTCTGAA
GGCAAAGATGTTAGTGGAGCAGTTGTTCTAACTGAATTTAGATTCTAA

Upstream 100 bases:

>100_bases
ATATATCTCGCTGTATAAAAAGATACTTCTAAGAACTTTCGCCCTGAAATGTCTTATTGAATACACTATCCTAAGTTTGA
AATATTTGTGTGAGGACACA

Downstream 100 bases:

>100_bases
TTCTTGTAGTTAGGAGATTTGAAAACGCCCCTTATTTGGGGCGTTTTTTTTTGCATTAAAAAAGCCCCTTTACAGGGGCT
TTTCGTCTTTTTATATTTTT

Product: porin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MKLFQRLLVAPAALGLMAPLAANADVTAVSNDSDLSSEVIQARVDGVEAQLGEIMAGQFSSSTKMSGKAAFITGYVDDDA
ESDTDSITMEYMYQLNMNTSFTGEDMLYTRLKAGNVSDHFVDKGQGTYLSAGKNTSDSLTVDKIWYQFPVGDDVTVWVGP
KIENYYMLASSPSIYKPVTKQFSLGGNGTVYGSSTKAGFGAAYVQPTEDPSAGRFAVSVAYTNQSGAKSGKDQGLFGEDG
KSALLTKLEYGTPQWQVSGAVALKENGWSDSYFTTAAGKARSAAGSETAVGLRAYWRPDTTGAIPEVQLGYDVSTIDDAP
TGFADEASGWMVGLGWKDLLIDGNRAGVAFGSRVSATSIVGGTSDPSEDNSVWEAYYSFKINDGVTVTPAIFGGSDVESE
GKDVSGAVVLTEFRF

Sequences:

>Translated_415_residues
MKLFQRLLVAPAALGLMAPLAANADVTAVSNDSDLSSEVIQARVDGVEAQLGEIMAGQFSSSTKMSGKAAFITGYVDDDA
ESDTDSITMEYMYQLNMNTSFTGEDMLYTRLKAGNVSDHFVDKGQGTYLSAGKNTSDSLTVDKIWYQFPVGDDVTVWVGP
KIENYYMLASSPSIYKPVTKQFSLGGNGTVYGSSTKAGFGAAYVQPTEDPSAGRFAVSVAYTNQSGAKSGKDQGLFGEDG
KSALLTKLEYGTPQWQVSGAVALKENGWSDSYFTTAAGKARSAAGSETAVGLRAYWRPDTTGAIPEVQLGYDVSTIDDAP
TGFADEASGWMVGLGWKDLLIDGNRAGVAFGSRVSATSIVGGTSDPSEDNSVWEAYYSFKINDGVTVTPAIFGGSDVESE
GKDVSGAVVLTEFRF
>Mature_415_residues
MKLFQRLLVAPAALGLMAPLAANADVTAVSNDSDLSSEVIQARVDGVEAQLGEIMAGQFSSSTKMSGKAAFITGYVDDDA
ESDTDSITMEYMYQLNMNTSFTGEDMLYTRLKAGNVSDHFVDKGQGTYLSAGKNTSDSLTVDKIWYQFPVGDDVTVWVGP
KIENYYMLASSPSIYKPVTKQFSLGGNGTVYGSSTKAGFGAAYVQPTEDPSAGRFAVSVAYTNQSGAKSGKDQGLFGEDG
KSALLTKLEYGTPQWQVSGAVALKENGWSDSYFTTAAGKARSAAGSETAVGLRAYWRPDTTGAIPEVQLGYDVSTIDDAP
TGFADEASGWMVGLGWKDLLIDGNRAGVAFGSRVSATSIVGGTSDPSEDNSVWEAYYSFKINDGVTVTPAIFGGSDVESE
GKDVSGAVVLTEFRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 43865; Mature: 43865

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFQRLLVAPAALGLMAPLAANADVTAVSNDSDLSSEVIQARVDGVEAQLGEIMAGQFS
CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCC
SSTKMSGKAAFITGYVDDDAESDTDSITMEYMYQLNMNTSFTGEDMLYTRLKAGNVSDHF
CCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHH
VDKGQGTYLSAGKNTSDSLTVDKIWYQFPVGDDVTVWVGPKIENYYMLASSPSIYKPVTK
HCCCCCCEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCHHCCCHH
QFSLGGNGTVYGSSTKAGFGAAYVQPTEDPSAGRFAVSVAYTNQSGAKSGKDQGLFGEDG
HEECCCCEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
KSALLTKLEYGTPQWQVSGAVALKENGWSDSYFTTAAGKARSAAGSETAVGLRAYWRPDT
CCEEEEEEECCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCC
TGAIPEVQLGYDVSTIDDAPTGFADEASGWMVGLGWKDLLIDGNRAGVAFGSRVSATSIV
CCCCCCEEECCCEECCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCEEECCCCCEEEEE
GGTSDPSEDNSVWEAYYSFKINDGVTVTPAIFGGSDVESEGKDVSGAVVLTEFRF
CCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKLFQRLLVAPAALGLMAPLAANADVTAVSNDSDLSSEVIQARVDGVEAQLGEIMAGQFS
CHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCC
SSTKMSGKAAFITGYVDDDAESDTDSITMEYMYQLNMNTSFTGEDMLYTRLKAGNVSDHF
CCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHH
VDKGQGTYLSAGKNTSDSLTVDKIWYQFPVGDDVTVWVGPKIENYYMLASSPSIYKPVTK
HCCCCCCEEECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCHHCCCHH
QFSLGGNGTVYGSSTKAGFGAAYVQPTEDPSAGRFAVSVAYTNQSGAKSGKDQGLFGEDG
HEECCCCEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
KSALLTKLEYGTPQWQVSGAVALKENGWSDSYFTTAAGKARSAAGSETAVGLRAYWRPDT
CCEEEEEEECCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCC
TGAIPEVQLGYDVSTIDDAPTGFADEASGWMVGLGWKDLLIDGNRAGVAFGSRVSATSIV
CCCCCCEEECCCEECCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCEEECCCCCEEEEE
GGTSDPSEDNSVWEAYYSFKINDGVTVTPAIFGGSDVESEGKDVSGAVVLTEFRF
CCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]