| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is yheT [H]
Identifier: 124026298
GI number: 124026298
Start: 1302418
End: 1303518
Strand: Reverse
Name: yheT [H]
Synonym: NATL1_15921
Alternate gene names: 124026298
Gene position: 1303518-1302418 (Counterclockwise)
Preceding gene: 124026299
Following gene: 124026296
Centisome position: 69.9
GC content: 34.24
Gene sequence:
>1101_bases TTGGTAGCAAAGGATAATTTGAAAAGAGAGGAGTTACTTTCAGACTTAGGACTACAACCATTTAAGGAGCGCATTCCATG GATTGGTCCTGATCTTCAGACACTTAGAGATACCTTCTCTTCAGATGAATTGCCTGATGCCAATTCATCTGAAATTCGTA TAAATGTCCCACCTCTTAAGAGTAGAAAAACAGGGGGTGGATCATTAGTTGCATACTTGGATAAACCACCTATTACTTCT AGTCTTAATGGTTTAGTTCTTCTTCTGCATGGACTGGGAGGCTCTTCTCGCAGAAGAGGCTTGACTAGGATGGCCAGTGC TTTGGTGCAGTCAAATTTTGCTGTTTTGAAACTTAATTTGAGAGGTTCAGATCCTTGTAGGAATTATGTCGATGGTACCT ATGCTGCAGAGTGCAATAGTGATTTGATTCCTGTTTTAAGACGTGCGAGAGAGATTTCATTTCAATTAACTAATGAGTAT AGATGTGTAAAAAATATTCCTCTTTTTGGAGCGGGTATCTCTTTGGGTGGAACTATTCTTTTAAATGCTTGTATGGGTAA TGAATCTTTGTTGGATGGATTGGTATGTATTAGTAGTCCTTTGGATTTACACGAATGTAGTTCTTCTATTGAAAGACCGA GAAATTTTATTTATCAAAAATGGTTGTTAAATCGTTTGATTAGGCAAACTTTAGAAGATCCTTTTGGGATAGAAGAAATA GAAAGAAATGCTTTAGTAATAAATAAAAAAGATAAAAAAAGAAAAATAAATGATATTAGATCTTTTGATAATTTTATAAC TGCTCCTAGATGGGGATATAAAAACGTTGAGGAATATTATGCGAACGCATCTCCTTTTTTCTCTCTTATTAAGAATGAAA AATCTCTTCCAAAAACATTATTTATTCAATCTAAAGATGATCCTTGGGTTCCTTTTTTAGCTGCTGAAAAACTAATGGAA AAAATGAAATTTTCGAATGATCAAAAAATCAATCAATTTATTTTTACGGAGAAAGGCGGACACAATGGATTTCATGGCAA TGAAGGATGCTGGGGGGATCAAGTTGTTTGTAAGTGGTTTTTATCTTTGAAAACTATTTAA
Upstream 100 bases:
>100_bases ATAAAAAACGATCTTTTTGACCTGCCTAATACTTCTATGGTCTTTGGAGATGCAAAAAAAGTTCTTGGCGATCTTTTGTT GGAACTAAAGGATCTTGGAG
Downstream 100 bases:
>100_bases TCTAAAACTGCATTTTTTTAATATTTTTTTCTGAATAATCTAAGACTTCTTCTCTTGCCCAGTTGTCAATTTCAAGAATT TCACTGAGGCTTGGATTTAG
Product: putative hydrolase of the alpha/beta-hydrolase fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MVAKDNLKREELLSDLGLQPFKERIPWIGPDLQTLRDTFSSDELPDANSSEIRINVPPLKSRKTGGGSLVAYLDKPPITS SLNGLVLLLHGLGGSSRRRGLTRMASALVQSNFAVLKLNLRGSDPCRNYVDGTYAAECNSDLIPVLRRAREISFQLTNEY RCVKNIPLFGAGISLGGTILLNACMGNESLLDGLVCISSPLDLHECSSSIERPRNFIYQKWLLNRLIRQTLEDPFGIEEI ERNALVINKKDKKRKINDIRSFDNFITAPRWGYKNVEEYYANASPFFSLIKNEKSLPKTLFIQSKDDPWVPFLAAEKLME KMKFSNDQKINQFIFTEKGGHNGFHGNEGCWGDQVVCKWFLSLKTI
Sequences:
>Translated_366_residues MVAKDNLKREELLSDLGLQPFKERIPWIGPDLQTLRDTFSSDELPDANSSEIRINVPPLKSRKTGGGSLVAYLDKPPITS SLNGLVLLLHGLGGSSRRRGLTRMASALVQSNFAVLKLNLRGSDPCRNYVDGTYAAECNSDLIPVLRRAREISFQLTNEY RCVKNIPLFGAGISLGGTILLNACMGNESLLDGLVCISSPLDLHECSSSIERPRNFIYQKWLLNRLIRQTLEDPFGIEEI ERNALVINKKDKKRKINDIRSFDNFITAPRWGYKNVEEYYANASPFFSLIKNEKSLPKTLFIQSKDDPWVPFLAAEKLME KMKFSNDQKINQFIFTEKGGHNGFHGNEGCWGDQVVCKWFLSLKTI >Mature_366_residues MVAKDNLKREELLSDLGLQPFKERIPWIGPDLQTLRDTFSSDELPDANSSEIRINVPPLKSRKTGGGSLVAYLDKPPITS SLNGLVLLLHGLGGSSRRRGLTRMASALVQSNFAVLKLNLRGSDPCRNYVDGTYAAECNSDLIPVLRRAREISFQLTNEY RCVKNIPLFGAGISLGGTILLNACMGNESLLDGLVCISSPLDLHECSSSIERPRNFIYQKWLLNRLIRQTLEDPFGIEEI ERNALVINKKDKKRKINDIRSFDNFITAPRWGYKNVEEYYANASPFFSLIKNEKSLPKTLFIQSKDDPWVPFLAAEKLME KMKFSNDQKINQFIFTEKGGHNGFHGNEGCWGDQVVCKWFLSLKTI
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=311, Percent_Identity=25.4019292604502, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI194578891, Length=290, Percent_Identity=26.8965517241379, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1789752, Length=278, Percent_Identity=27.6978417266187, Blast_Score=75, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6323866, Length=292, Percent_Identity=27.3972602739726, Blast_Score=73, Evalue=6e-14, Organism=Drosophila melanogaster, GI24652003, Length=285, Percent_Identity=30.5263157894737, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI281398151, Length=273, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 41306; Mature: 41306
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAKDNLKREELLSDLGLQPFKERIPWIGPDLQTLRDTFSSDELPDANSSEIRINVPPLK CCCCCCCCHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCC SRKTGGGSLVAYLDKPPITSSLNGLVLLLHGLGGSSRRRGLTRMASALVQSNFAVLKLNL CCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEC RGSDPCRNYVDGTYAAECNSDLIPVLRRAREISFQLTNEYRCVKNIPLFGAGISLGGTIL CCCCHHHHHCCCCEECCCCCCHHHHHHHHHHHHEEECCCCHHHHCCCEEECCCCCCCHHE LNACMGNESLLDGLVCISSPLDLHECSSSIERPRNFIYQKWLLNRLIRQTLEDPFGIEEI EEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ERNALVINKKDKKRKINDIRSFDNFITAPRWGYKNVEEYYANASPFFSLIKNEKSLPKTL CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCEE FIQSKDDPWVPFLAAEKLMEKMKFSNDQKINQFIFTEKGGHNGFHGNEGCWGDQVVCKWF EEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHH LSLKTI HHHCCC >Mature Secondary Structure MVAKDNLKREELLSDLGLQPFKERIPWIGPDLQTLRDTFSSDELPDANSSEIRINVPPLK CCCCCCCCHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCC SRKTGGGSLVAYLDKPPITSSLNGLVLLLHGLGGSSRRRGLTRMASALVQSNFAVLKLNL CCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEC RGSDPCRNYVDGTYAAECNSDLIPVLRRAREISFQLTNEYRCVKNIPLFGAGISLGGTIL CCCCHHHHHCCCCEECCCCCCHHHHHHHHHHHHEEECCCCHHHHCCCEEECCCCCCCHHE LNACMGNESLLDGLVCISSPLDLHECSSSIERPRNFIYQKWLLNRLIRQTLEDPFGIEEI EEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ERNALVINKKDKKRKINDIRSFDNFITAPRWGYKNVEEYYANASPFFSLIKNEKSLPKTL CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCEE FIQSKDDPWVPFLAAEKLMEKMKFSNDQKINQFIFTEKGGHNGFHGNEGCWGDQVVCKWF EEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHH LSLKTI HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]