| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026282
Identifier: 124026282
GI number: 124026282
Start: 1283204
End: 1284946
Strand: Direct
Name: 124026282
Synonym: NATL1_15761
Alternate gene names: NA
Gene position: 1283204-1284946 (Clockwise)
Preceding gene: 124026279
Following gene: 124026283
Centisome position: 68.81
GC content: 36.03
Gene sequence:
>1743_bases ATGGGAACTTTAGACGGTGTATATAAAAGCTATCAAATTGAAACTAGTTTAGAAATAGAGCCTTTTAATAGATACATAGA AGTTTATGGAGTCAAAATAGCTGGATTGAAAGCAACAGGAGGAAACGTTGCTGTAAAAGATGAATTTATTAGAAAGATAG CCCAAACAACAAAATTACTACTCAACCCAGAAGACACATCGATTGATTCAGACTCTCAAATTAAAGCTATTAAGCATTTA AAAACTATAAATACCCTACAAAGAATAGGAGTTGACGAAATGGATTCGTACACTCCTACGCTAAACGGAGATAATTATTC AGGATGGGACTTAACAAATGATCAGCATAGTCTTACCGATTTCATATGGCAATTCAACCTTTCTGGTAATTCGGACAAAA CAGCTAACAGTCAAATAACAGAAGTACTTGAACATTTACTCCATACCCTAGTTCGATTTGCCTTACCAGGTGCGTTCCCA GCGCAATTTCTATTTATTGAAGATAGAAGTCCTGAATACGGTGGGGATGTCACAAAAGAGGAGCCAATATTGTCTGGTTT GCTTTATGAAGCAGCAAAAGAAGCTATTAACAATAGGGTTTTTGATGCTTCAAGCTACAACCATATGGGAGTGGGTAGTT TCACATACTGGAAAACAGTAATGGTTGAATATCAATACGCTTTAACTTTTGCAGAATGGGGATACATTGAAAAATATTCA GGCAGTCTTGACCCAGAATGGTCAGATAATTACTTAACTTCCGACAAGATTAAAGAAGGGAATCCTTTAGGACATAGCTT GTATGAAAACTACATTAAAAAAGTAATTAGTAAGCCTTCTAGTAATGAACTGGAAGAAATTTTCAAAGAAAACAACCAAG GGCTTTCTGGATATATAGCAAACACTGGGAGCAGTTCAAATGATGAGCTTACTGGAAGTAGCAGTAATGAAACTTTCTTC GCCTCAGAAGGCTCGGATATAATCAATGGGAAAGGAGGTAACGACACTTCTATTTATTCTGGAAAGTTTTCTGATTATTC CTTTACAAGAGAAGACAATTCATTAGCCATTGCCGATCAAAGAACAGGTAAAAATAATGGGACAGATACTCTTTCAAATA TTGAATACATTCAGTTTTCAGATCAAAAAGTAGAAGAATCAAAGGTAGACGTTGTTAAAACATATAGCGGTAAATTTAGT GATTATAAATTTTACAATAAAGGTAATGGTGTCTATCAGATCAAAACAGATTCTGGCTATGACGATATTACTGGCTTTCC CTTATTAACCTTTACGGGAGAAGGTACGACAAGTTCCTTTAAAGACATTAGTGCCATTGCTGATATCAAAGGAACGTTCG ATCAAGTCACTGGCTTAAATACAGATTCAGGGCGTATGTTCCGTTTATACAACGCATCATTTAAACGATTACCTGATTCA GATGGACTTGCTTATTGGATTGATAATTTCAGTTCAGGTCGTAATAGCATCAGAGTCGTTGCATCATCATTTTTAGGTTC AGCTGAATTTGCTGAACGTTATGGAGACAATGTTTCTGATTCAACTTACGTCAATACTCTCTATAAAAATGTTCTTGGAC GTGATGCTGATGCTGGAGGTTTGAACTACTGGTTAGGTCAATTAAATAGTGGGGCTGAAACTCGATACGAAGTTCTTCTA GGATTCTCTGAATCAGCTGAGAACAAAACTCTCTTTACCGAAATGACTGGGTTGATTGAATAA
Upstream 100 bases:
>100_bases GGGTTAGACCAGTACAACAAAAAGATAGACCATTACTGAGACAGGTTGAGACTACTCACTCAAATATTTTATTTAATAAG ATAGGATTTTGACTTTGGGA
Downstream 100 bases:
>100_bases CAGAACTTTTTGAATACTAAAAAGACAAAAAAATCCATATAAATTCATTAAAAAGTTAGACGGTTGTGAGAAATCTTGAG ATCCGACCAAGATCTAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 580; Mature: 579
Protein sequence:
>580_residues MGTLDGVYKSYQIETSLEIEPFNRYIEVYGVKIAGLKATGGNVAVKDEFIRKIAQTTKLLLNPEDTSIDSDSQIKAIKHL KTINTLQRIGVDEMDSYTPTLNGDNYSGWDLTNDQHSLTDFIWQFNLSGNSDKTANSQITEVLEHLLHTLVRFALPGAFP AQFLFIEDRSPEYGGDVTKEEPILSGLLYEAAKEAINNRVFDASSYNHMGVGSFTYWKTVMVEYQYALTFAEWGYIEKYS GSLDPEWSDNYLTSDKIKEGNPLGHSLYENYIKKVISKPSSNELEEIFKENNQGLSGYIANTGSSSNDELTGSSSNETFF ASEGSDIINGKGGNDTSIYSGKFSDYSFTREDNSLAIADQRTGKNNGTDTLSNIEYIQFSDQKVEESKVDVVKTYSGKFS DYKFYNKGNGVYQIKTDSGYDDITGFPLLTFTGEGTTSSFKDISAIADIKGTFDQVTGLNTDSGRMFRLYNASFKRLPDS DGLAYWIDNFSSGRNSIRVVASSFLGSAEFAERYGDNVSDSTYVNTLYKNVLGRDADAGGLNYWLGQLNSGAETRYEVLL GFSESAENKTLFTEMTGLIE
Sequences:
>Translated_580_residues MGTLDGVYKSYQIETSLEIEPFNRYIEVYGVKIAGLKATGGNVAVKDEFIRKIAQTTKLLLNPEDTSIDSDSQIKAIKHL KTINTLQRIGVDEMDSYTPTLNGDNYSGWDLTNDQHSLTDFIWQFNLSGNSDKTANSQITEVLEHLLHTLVRFALPGAFP AQFLFIEDRSPEYGGDVTKEEPILSGLLYEAAKEAINNRVFDASSYNHMGVGSFTYWKTVMVEYQYALTFAEWGYIEKYS GSLDPEWSDNYLTSDKIKEGNPLGHSLYENYIKKVISKPSSNELEEIFKENNQGLSGYIANTGSSSNDELTGSSSNETFF ASEGSDIINGKGGNDTSIYSGKFSDYSFTREDNSLAIADQRTGKNNGTDTLSNIEYIQFSDQKVEESKVDVVKTYSGKFS DYKFYNKGNGVYQIKTDSGYDDITGFPLLTFTGEGTTSSFKDISAIADIKGTFDQVTGLNTDSGRMFRLYNASFKRLPDS DGLAYWIDNFSSGRNSIRVVASSFLGSAEFAERYGDNVSDSTYVNTLYKNVLGRDADAGGLNYWLGQLNSGAETRYEVLL GFSESAENKTLFTEMTGLIE >Mature_579_residues GTLDGVYKSYQIETSLEIEPFNRYIEVYGVKIAGLKATGGNVAVKDEFIRKIAQTTKLLLNPEDTSIDSDSQIKAIKHLK TINTLQRIGVDEMDSYTPTLNGDNYSGWDLTNDQHSLTDFIWQFNLSGNSDKTANSQITEVLEHLLHTLVRFALPGAFPA QFLFIEDRSPEYGGDVTKEEPILSGLLYEAAKEAINNRVFDASSYNHMGVGSFTYWKTVMVEYQYALTFAEWGYIEKYSG SLDPEWSDNYLTSDKIKEGNPLGHSLYENYIKKVISKPSSNELEEIFKENNQGLSGYIANTGSSSNDELTGSSSNETFFA SEGSDIINGKGGNDTSIYSGKFSDYSFTREDNSLAIADQRTGKNNGTDTLSNIEYIQFSDQKVEESKVDVVKTYSGKFSD YKFYNKGNGVYQIKTDSGYDDITGFPLLTFTGEGTTSSFKDISAIADIKGTFDQVTGLNTDSGRMFRLYNASFKRLPDSD GLAYWIDNFSSGRNSIRVVASSFLGSAEFAERYGDNVSDSTYVNTLYKNVLGRDADAGGLNYWLGQLNSGAETRYEVLLG FSESAENKTLFTEMTGLIE
Specific function: Unknown
COG id: COG2931
COG function: function code Q; RTX toxins and related Ca2+-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64453; Mature: 64322
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLDGVYKSYQIETSLEIEPFNRYIEVYGVKIAGLKATGGNVAVKDEFIRKIAQTTKLL CCCHHHHHHCEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCEEEHHHHHHHHHHHHHEE LNPEDTSIDSDSQIKAIKHLKTINTLQRIGVDEMDSYTPTLNGDNYSGWDLTNDQHSLTD ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHEE FIWQFNLSGNSDKTANSQITEVLEHLLHTLVRFALPGAFPAQFLFIEDRSPEYGGDVTKE EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC EPILSGLLYEAAKEAINNRVFDASSYNHMGVGSFTYWKTVMVEYQYALTFAEWGYIEKYS CHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHEEEEEEEEEEHHCCCEEECC GSLDPEWSDNYLTSDKIKEGNPLGHSLYENYIKKVISKPSSNELEEIFKENNQGLSGYIA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEE NTGSSSNDELTGSSSNETFFASEGSDIINGKGGNDTSIYSGKFSDYSFTREDNSLAIADQ ECCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCEEECCCCCCEEECCCCCEEEEEC RTGKNNGTDTLSNIEYIQFSDQKVEESKVDVVKTYSGKFSDYKFYNKGNGVYQIKTDSGY CCCCCCCCCCCCCCEEEEECCCHHHHHHCCEEEECCCCCCCEEEEECCCCEEEEECCCCC DDITGFPLLTFTGEGTTSSFKDISAIADIKGTFDQVTGLNTDSGRMFRLYNASFKRLPDS CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEECCHHHCCCCC DGLAYWIDNFSSGRNSIRVVASSFLGSAEFAERYGDNVSDSTYVNTLYKNVLGRDADAGG CCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC LNYWLGQLNSGAETRYEVLLGFSESAENKTLFTEMTGLIE HHHHHHCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHCC >Mature Secondary Structure GTLDGVYKSYQIETSLEIEPFNRYIEVYGVKIAGLKATGGNVAVKDEFIRKIAQTTKLL CCHHHHHHCEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCEEEHHHHHHHHHHHHHEE LNPEDTSIDSDSQIKAIKHLKTINTLQRIGVDEMDSYTPTLNGDNYSGWDLTNDQHSLTD ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHEE FIWQFNLSGNSDKTANSQITEVLEHLLHTLVRFALPGAFPAQFLFIEDRSPEYGGDVTKE EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC EPILSGLLYEAAKEAINNRVFDASSYNHMGVGSFTYWKTVMVEYQYALTFAEWGYIEKYS CHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHEEEEEEEEEEHHCCCEEECC GSLDPEWSDNYLTSDKIKEGNPLGHSLYENYIKKVISKPSSNELEEIFKENNQGLSGYIA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEE NTGSSSNDELTGSSSNETFFASEGSDIINGKGGNDTSIYSGKFSDYSFTREDNSLAIADQ ECCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCEEECCCCCCEEECCCCCEEEEEC RTGKNNGTDTLSNIEYIQFSDQKVEESKVDVVKTYSGKFSDYKFYNKGNGVYQIKTDSGY CCCCCCCCCCCCCCEEEEECCCHHHHHHCCEEEECCCCCCCEEEEECCCCEEEEECCCCC DDITGFPLLTFTGEGTTSSFKDISAIADIKGTFDQVTGLNTDSGRMFRLYNASFKRLPDS CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEECCHHHCCCCC DGLAYWIDNFSSGRNSIRVVASSFLGSAEFAERYGDNVSDSTYVNTLYKNVLGRDADAGG CCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC LNYWLGQLNSGAETRYEVLLGFSESAENKTLFTEMTGLIE HHHHHHCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA