| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026279
Identifier: 124026279
GI number: 124026279
Start: 1280118
End: 1280729
Strand: Direct
Name: 124026279
Synonym: NATL1_15731
Alternate gene names: NA
Gene position: 1280118-1280729 (Clockwise)
Preceding gene: 124026278
Following gene: 124026282
Centisome position: 68.65
GC content: 36.76
Gene sequence:
>612_bases ATGAAATTAACTTTAATTCTCCTTGCAGGTTGCCTGTTGACACCTTCAAGTTCAATCTCAGAAGAGCTTTTTCAAAAGTC CCCTAATACTCAAAATATTTCTACGAAAACCAACCTAGTTGCAGCTTGGAACCCAGTTAAAAATAAAACATCTTCAACAC AAGGAGCAAAAGAAAAAACACAAATTGCTCTAGAAAATTTCATGACAATGCCAGAACTAAAACCATATTTCAAAAAAGCA AAAGGTTATGCCGTGTTTCCAACAGTAGGCAAAGGTGGTATAGGAATCGGAGGTGCACGTGGAAAAGGAGAGGTATTTCG AGATGGAAAAGTAATTGGATCAACCACACTTACTCAAGTTTCAATAGGTTTCCAACTAGGAGGTCAAGCTTTTAGTCAAA TAATCTTTTTCAAAGGTAAAAGAGATCTCAATCGATTTATCCAAGGTAATTTTGAATTTGGAGCATCAGCAAGCGCAGCT CTTATTAATTCAGGAGCAGCCGTTGAAACTTCTTATAGCAATGGTGTAGCTGTTTTAACAGTCTCAAAAGGTGGACTTAT GTACGAAGCAAGCATTGGTGGTCAAAAATTTAGCTATGAACCTTACAACTAA
Upstream 100 bases:
>100_bases AATTTTTAGTCCGGTATAAACTGTCAAGTCCCCTTAGTTCTAGTCAGGATAGGTTGTCTATTATTATTAAGACTCGATAG TTAATCATTAGGTTTTCAAT
Downstream 100 bases:
>100_bases AGGAGCAAATGACTATTTTTCATAGATAACAGCTACAGAACAAAAAACCTTACAAAATCATCTCAGAAGATTAGAATAGG GTATAATTAATGAATGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKLTLILLAGCLLTPSSSISEELFQKSPNTQNISTKTNLVAAWNPVKNKTSSTQGAKEKTQIALENFMTMPELKPYFKKA KGYAVFPTVGKGGIGIGGARGKGEVFRDGKVIGSTTLTQVSIGFQLGGQAFSQIIFFKGKRDLNRFIQGNFEFGASASAA LINSGAAVETSYSNGVAVLTVSKGGLMYEASIGGQKFSYEPYN
Sequences:
>Translated_203_residues MKLTLILLAGCLLTPSSSISEELFQKSPNTQNISTKTNLVAAWNPVKNKTSSTQGAKEKTQIALENFMTMPELKPYFKKA KGYAVFPTVGKGGIGIGGARGKGEVFRDGKVIGSTTLTQVSIGFQLGGQAFSQIIFFKGKRDLNRFIQGNFEFGASASAA LINSGAAVETSYSNGVAVLTVSKGGLMYEASIGGQKFSYEPYN >Mature_203_residues MKLTLILLAGCLLTPSSSISEELFQKSPNTQNISTKTNLVAAWNPVKNKTSSTQGAKEKTQIALENFMTMPELKPYFKKA KGYAVFPTVGKGGIGIGGARGKGEVFRDGKVIGSTTLTQVSIGFQLGGQAFSQIIFFKGKRDLNRFIQGNFEFGASASAA LINSGAAVETSYSNGVAVLTVSKGGLMYEASIGGQKFSYEPYN
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21572; Mature: 21572
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTLILLAGCLLTPSSSISEELFQKSPNTQNISTKTNLVAAWNPVKNKTSSTQGAKEKT CEEEEEEEHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHH QIALENFMTMPELKPYFKKAKGYAVFPTVGKGGIGIGGARGKGEVFRDGKVIGSTTLTQV HHHHHHHHCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEECCEEECCCEEEEE SIGFQLGGQAFSQIIFFKGKRDLNRFIQGNFEFGASASAALINSGAAVETSYSNGVAVLT EECEEECHHHHHEEEEEECCHHHHHHHCCCCCCCCCCCHHEECCCCEEEEECCCCEEEEE VSKGGLMYEASIGGQKFSYEPYN EECCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MKLTLILLAGCLLTPSSSISEELFQKSPNTQNISTKTNLVAAWNPVKNKTSSTQGAKEKT CEEEEEEEHHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHH QIALENFMTMPELKPYFKKAKGYAVFPTVGKGGIGIGGARGKGEVFRDGKVIGSTTLTQV HHHHHHHHCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEECCEEECCCEEEEE SIGFQLGGQAFSQIIFFKGKRDLNRFIQGNFEFGASASAALINSGAAVETSYSNGVAVLT EECEEECHHHHHEEEEEECCHHHHHHHCCCCCCCCCCCHHEECCCCEEEEECCCCEEEEE VSKGGLMYEASIGGQKFSYEPYN EECCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA