| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026257
Identifier: 124026257
GI number: 124026257
Start: 1260318
End: 1260659
Strand: Direct
Name: 124026257
Synonym: NATL1_15511
Alternate gene names: NA
Gene position: 1260318-1260659 (Clockwise)
Preceding gene: 124026255
Following gene: 124026259
Centisome position: 67.59
GC content: 34.8
Gene sequence:
>342_bases ATGCCATTCATTCAAATCAACACATCCTCAAAAAGTGTTGTAGAAAATGATGATTTGCTCCAAAAAGATATTTCAAAAAT GATTGCTGTTTTAACCGGAAAACCGGAAAATTACGTAATGACGATGATCCAAAAAAATGCCAAAATGACATTTGCTGGAT CCGATGAACCATGCTGTTTTATCAAGGTTCAATCAATTGGCTCGCTAAACCCATCCTCGATGAGCAAGGCTTTGTGCGAG TTAATTGCATCTAAAACCAATATAAATACAAATAGAATTTATATTGAATTTTTCGACGTTGAAGCCTCAAATTGGGGATT CAATGGTTCAACATTTGGATAG
Upstream 100 bases:
>100_bases TCTGTTGATAATTTTGGAGAAAAGAGGCTTAGATCTTTCTATCTTTTTAAAAATCAATCTCCCATTCAAGTATTAATATC TGTCAAAGACTGATTCACTT
Downstream 100 bases:
>100_bases GAAGGAAATTTATTATCTTTTGTAATCATTATTGAAAATATCTTAATTGAATCAACCAACTATTCATTTAACTAAGAGAG TTCACAACCCTTTTCAGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: Macrophage Migration Inhibitory Factor; ATLS1-Like Light-Inducible Protein; Phenylpyruvate Tautomerase; Macrophage Migration Inhibitory Factor Superfamily; MIF/Phenylpyruvate Tautomerase Family Protein; Macrophage Migration Inhibitory Factor Family; Glycosyl Transferase
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MPFIQINTSSKSVVENDDLLQKDISKMIAVLTGKPENYVMTMIQKNAKMTFAGSDEPCCFIKVQSIGSLNPSSMSKALCE LIASKTNINTNRIYIEFFDVEASNWGFNGSTFG
Sequences:
>Translated_113_residues MPFIQINTSSKSVVENDDLLQKDISKMIAVLTGKPENYVMTMIQKNAKMTFAGSDEPCCFIKVQSIGSLNPSSMSKALCE LIASKTNINTNRIYIEFFDVEASNWGFNGSTFG >Mature_112_residues PFIQINTSSKSVVENDDLLQKDISKMIAVLTGKPENYVMTMIQKNAKMTFAGSDEPCCFIKVQSIGSLNPSSMSKALCEL IASKTNINTNRIYIEFFDVEASNWGFNGSTFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4505185, Length=115, Percent_Identity=35.6521739130435, Blast_Score=82, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17556260, Length=116, Percent_Identity=30.1724137931034, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12486; Mature: 12355
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFIQINTSSKSVVENDDLLQKDISKMIAVLTGKPENYVMTMIQKNAKMTFAGSDEPCCF CCEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCHHEEEEEECCCEEEECCCCCCEEE IKVQSIGSLNPSSMSKALCELIASKTNINTNRIYIEFFDVEASNWGFNGSTFG EEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure PFIQINTSSKSVVENDDLLQKDISKMIAVLTGKPENYVMTMIQKNAKMTFAGSDEPCCF CEEEEECCCCCEECCCHHHHHHHHHHHHHHCCCCCHHEEEEEECCCEEEECCCCCCEEE IKVQSIGSLNPSSMSKALCELIASKTNINTNRIYIEFFDVEASNWGFNGSTFG EEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA