Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124026247

Identifier: 124026247

GI number: 124026247

Start: 1255457

End: 1256695

Strand: Direct

Name: 124026247

Synonym: NATL1_15411

Alternate gene names: NA

Gene position: 1255457-1256695 (Clockwise)

Preceding gene: 124026245

Following gene: 124026249

Centisome position: 67.33

GC content: 30.43

Gene sequence:

>1239_bases
ATGAATTTGTTCTCAACTTCTATTGTTAGCAATTATTGGGAGAAATTCCCTGTATCCCTAAGACTAATCATAAAAGCTCG
TTTATGGACAGCAATAGGAGCAGGAGGGGTATTGTATTTAAGTCCGATAATATTCAATAGTTTAGGTTTTTCAGCAGAGC
AAATCGGAAGAGGAATAACCACAGCGGCATTTGCTGGAATAACGACAAGATTTGGGACGGGATATTTACTTGACAAAAAA
TTTAGCTCTATAAAAGCAATTAAAGTTGCATGTTTATTTGCAATTTTATCGGATTTTATACTTTTTTATTCGCAAAATTT
CTTAGCTTTCCTTTGTGGTCAGTTTTTCTTAGGAGCTGCAGCTGGAATATATTGGCCTTCTGCGGAATTAGCTATTCCAT
CAAATTGCAATACCAAAATAAAATCAAGTGAAGGTTATTCTCTTGCAAGAAGTGCTGATGCAATTGGAGTCACATTAGGG
GTCTTACTTGGTACTATAGGATCTTATTTTGAATTCCCAAGAATAATATATTTAATAGATATTTTATGCATGTTATATAT
ATTAAATATATTATTAAATAAGCTAGACAAAAGTAGAAACAAAATTGCTTTCAAGATCAAAGGCGATTTAGATGTTAAAT
ATAAATCTCTTGAAAAAAAATACAATCTGAAATGGATAATAAGTTTACTACCTTTATTATTAATAACTCTATTTGTAACA
GGGATAATGAGTTTATTACAAAGCATCCTTCCTATAGATTTAGCGAACGGAGGGATAATAAGGCCACCATTCACAGACCA
AAAAGTAGCTACATTATTAACAATTAAACTCATTTTACTTGCTTTTTTTCAATGGCCAGTGGGTTATATTTTAAGAAATA
AAAATTCACCTTTTAAATTCAGATTATGCTTAATATCTCTACTCATAGGTTTTATTTTTTTGTCACTTTCAAATTTCTTA
CTTGATGGATATCTATTAATACTTATAGCTTTCATACCACTAACAATATCTCTATGTATATTTTTACCCTCTGCTTCAGA
TGCAATTATAAATTCTGCTCCCATTAAATATCAAGGTTCAGCCATAGCATTATATTCACAATGTTTTGGCATTAGTTCTT
TAACAGTACCTTGGATGGCGGGAAAATTAATTGACACTTATGATACAGCCCTTCAACTATGGTTAATTGTTAGTATTCTT
TGTATACTTTTAGTACCAATATCTAAGAATATTAAATAA

Upstream 100 bases:

>100_bases
AAATGAATTTCAAATCTCTCTGCTGCTTGAAGTTTTGGATAAAAACAATAAGGAGCTAGTAAGCTTCCAACTGTTCCAAG
AACAACTAATTTTTTAATGA

Downstream 100 bases:

>100_bases
TAAAATATTTAATTCAATTCCTATTCATCTCTTCAATTCTTAATTCCCTTAGATATAGAAAAAGAGGAGCTGAAAAAGCA
AATGCGATTGTAAATGTAGT

Product: major facilitator superfamily multidrug-efflux transporter

Products: NA

Alternate protein names: Facilitator Superfamily Permease; Permease Facilitator Superfamily; Transporter Facilitator Family Protein; Facilitator Superfamily Multidrug-Efflux Transporter-Like

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MNLFSTSIVSNYWEKFPVSLRLIIKARLWTAIGAGGVLYLSPIIFNSLGFSAEQIGRGITTAAFAGITTRFGTGYLLDKK
FSSIKAIKVACLFAILSDFILFYSQNFLAFLCGQFFLGAAAGIYWPSAELAIPSNCNTKIKSSEGYSLARSADAIGVTLG
VLLGTIGSYFEFPRIIYLIDILCMLYILNILLNKLDKSRNKIAFKIKGDLDVKYKSLEKKYNLKWIISLLPLLLITLFVT
GIMSLLQSILPIDLANGGIIRPPFTDQKVATLLTIKLILLAFFQWPVGYILRNKNSPFKFRLCLISLLIGFIFLSLSNFL
LDGYLLILIAFIPLTISLCIFLPSASDAIINSAPIKYQGSAIALYSQCFGISSLTVPWMAGKLIDTYDTALQLWLIVSIL
CILLVPISKNIK

Sequences:

>Translated_412_residues
MNLFSTSIVSNYWEKFPVSLRLIIKARLWTAIGAGGVLYLSPIIFNSLGFSAEQIGRGITTAAFAGITTRFGTGYLLDKK
FSSIKAIKVACLFAILSDFILFYSQNFLAFLCGQFFLGAAAGIYWPSAELAIPSNCNTKIKSSEGYSLARSADAIGVTLG
VLLGTIGSYFEFPRIIYLIDILCMLYILNILLNKLDKSRNKIAFKIKGDLDVKYKSLEKKYNLKWIISLLPLLLITLFVT
GIMSLLQSILPIDLANGGIIRPPFTDQKVATLLTIKLILLAFFQWPVGYILRNKNSPFKFRLCLISLLIGFIFLSLSNFL
LDGYLLILIAFIPLTISLCIFLPSASDAIINSAPIKYQGSAIALYSQCFGISSLTVPWMAGKLIDTYDTALQLWLIVSIL
CILLVPISKNIK
>Mature_412_residues
MNLFSTSIVSNYWEKFPVSLRLIIKARLWTAIGAGGVLYLSPIIFNSLGFSAEQIGRGITTAAFAGITTRFGTGYLLDKK
FSSIKAIKVACLFAILSDFILFYSQNFLAFLCGQFFLGAAAGIYWPSAELAIPSNCNTKIKSSEGYSLARSADAIGVTLG
VLLGTIGSYFEFPRIIYLIDILCMLYILNILLNKLDKSRNKIAFKIKGDLDVKYKSLEKKYNLKWIISLLPLLLITLFVT
GIMSLLQSILPIDLANGGIIRPPFTDQKVATLLTIKLILLAFFQWPVGYILRNKNSPFKFRLCLISLLIGFIFLSLSNFL
LDGYLLILIAFIPLTISLCIFLPSASDAIINSAPIKYQGSAIALYSQCFGISSLTVPWMAGKLIDTYDTALQLWLIVSIL
CILLVPISKNIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45569; Mature: 45569

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFSTSIVSNYWEKFPVSLRLIIKARLWTAIGAGGVLYLSPIIFNSLGFSAEQIGRGIT
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHH
TAAFAGITTRFGTGYLLDKKFSSIKAIKVACLFAILSDFILFYSQNFLAFLCGQFFLGAA
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIYWPSAELAIPSNCNTKIKSSEGYSLARSADAIGVTLGVLLGTIGSYFEFPRIIYLID
HHCCCCCCCEECCCCCCCCEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILCMLYILNILLNKLDKSRNKIAFKIKGDLDVKYKSLEKKYNLKWIISLLPLLLITLFVT
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GIMSLLQSILPIDLANGGIIRPPFTDQKVATLLTIKLILLAFFQWPVGYILRNKNSPFKF
HHHHHHHHHCCEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH
RLCLISLLIGFIFLSLSNFLLDGYLLILIAFIPLTISLCIFLPSASDAIINSAPIKYQGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEECCC
AIALYSQCFGISSLTVPWMAGKLIDTYDTALQLWLIVSILCILLVPISKNIK
CHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNLFSTSIVSNYWEKFPVSLRLIIKARLWTAIGAGGVLYLSPIIFNSLGFSAEQIGRGIT
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHH
TAAFAGITTRFGTGYLLDKKFSSIKAIKVACLFAILSDFILFYSQNFLAFLCGQFFLGAA
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIYWPSAELAIPSNCNTKIKSSEGYSLARSADAIGVTLGVLLGTIGSYFEFPRIIYLID
HHCCCCCCCEECCCCCCCCEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILCMLYILNILLNKLDKSRNKIAFKIKGDLDVKYKSLEKKYNLKWIISLLPLLLITLFVT
HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GIMSLLQSILPIDLANGGIIRPPFTDQKVATLLTIKLILLAFFQWPVGYILRNKNSPFKF
HHHHHHHHHCCEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHH
RLCLISLLIGFIFLSLSNFLLDGYLLILIAFIPLTISLCIFLPSASDAIINSAPIKYQGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEECCC
AIALYSQCFGISSLTVPWMAGKLIDTYDTALQLWLIVSILCILLVPISKNIK
CHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA