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The map label for this gene is 124026224

Identifier: 124026224

GI number: 124026224

Start: 1232982

End: 1233359

Strand: Reverse

Name: 124026224

Synonym: NATL1_15181

Alternate gene names: NA

Gene position: 1233359-1232982 (Counterclockwise)

Preceding gene: 124026225

Following gene: 124026222

Centisome position: 66.14

GC content: 37.83

Gene sequence:

>378_bases
ATGCGCGGCTACTGGACGCTTACTTGGTTTGGTTTGATCTCGAATATACTTGCGATTCCTTTTATTGCTTTAGTAGTTGG
ATCAGGACCTCCCCTTCAAACAGCCAATATCACTCTTGCTATTAGTCTTGCTTGGCCAGCTGCCGTAACTGGAATTGTTG
CTTCAGCAGGTCTATTTGCTCAAAGAGGATGGGGTGTAATTTTATCAATAGTTGCTTTGTCAATGACTCTTTCAGGAACT
TTGCCTTATGGAATAATCAGATTAATTAAAGTAAATGATATTTTTGGAATAAGTGGTTTGACATTACTAATCTCTCTGCT
TAATTTATTAGCTCTAATCTACTGGTGTAGAAGAGGACATAGAAGAATAAGACTCTAA

Upstream 100 bases:

>100_bases
ATCCAGCTAATTGTTTGCAACCTTCTCTCGCGTAAATTAAATTATTAATATCATTTTTATGATTTTTTTTAAGAGAATAA
TTTTTTAAGGGGATTAAGGA

Downstream 100 bases:

>100_bases
CTCATACTTAAGATTTCAATAAGTCTTTTGATTTTCACCTTGGATTGAAGCTTGGGTATTTTAAGCGTCTGTGACGCATT
CTCCTCCATACAGAGACAAA

Product: adenoviral fiber protein

Products: NA

Alternate protein names: Hepatitis C Virus Core Protein; Core Protein-Like Protein; Fiber Protein

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MRGYWTLTWFGLISNILAIPFIALVVGSGPPLQTANITLAISLAWPAAVTGIVASAGLFAQRGWGVILSIVALSMTLSGT
LPYGIIRLIKVNDIFGISGLTLLISLLNLLALIYWCRRGHRRIRL

Sequences:

>Translated_125_residues
MRGYWTLTWFGLISNILAIPFIALVVGSGPPLQTANITLAISLAWPAAVTGIVASAGLFAQRGWGVILSIVALSMTLSGT
LPYGIIRLIKVNDIFGISGLTLLISLLNLLALIYWCRRGHRRIRL
>Mature_125_residues
MRGYWTLTWFGLISNILAIPFIALVVGSGPPLQTANITLAISLAWPAAVTGIVASAGLFAQRGWGVILSIVALSMTLSGT
LPYGIIRLIKVNDIFGISGLTLLISLLNLLALIYWCRRGHRRIRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13516; Mature: 13516

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGYWTLTWFGLISNILAIPFIALVVGSGPPLQTANITLAISLAWPAAVTGIVASAGLFA
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHH
QRGWGVILSIVALSMTLSGTLPYGIIRLIKVNDIFGISGLTLLISLLNLLALIYWCRRGH
HCCHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
RRIRL
CCCCC
>Mature Secondary Structure
MRGYWTLTWFGLISNILAIPFIALVVGSGPPLQTANITLAISLAWPAAVTGIVASAGLFA
CCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHH
QRGWGVILSIVALSMTLSGTLPYGIIRLIKVNDIFGISGLTLLISLLNLLALIYWCRRGH
HCCHHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
RRIRL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA