Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124026223

Identifier: 124026223

GI number: 124026223

Start: 1230968

End: 1232947

Strand: Direct

Name: 124026223

Synonym: NATL1_15171

Alternate gene names: NA

Gene position: 1230968-1232947 (Clockwise)

Preceding gene: 124026218

Following gene: 124026227

Centisome position: 66.01

GC content: 34.34

Gene sequence:

>1980_bases
ATGGTCTGTCTATTAGTAGCAATATTTTCAAGTTATAAGTTACTTGCTGTTCCGGATCTCAAACCTGGAGATATTGCTCA
AGTCAATGTAATAGCCCCTAGAGATGCAAAGGTAATAGACACAACGGATTTAAAAGAAAAGAAACAAGGCTTAAAAGAAA
GTTTTGTACAATCAATAGACAAGAATAAATCAAGTGATTTAGAAAAGACTGTTTCCAAGCAAATCAATATACTTCGTACT
CAAAAATTCAACAATTTTGGAATCGATTTCAATGAATTCAACATAACAACTCTAGAGAAAGATTGGATATTAAATGTTAA
AGACAATGAATGGGAAGAGTGGAAAAAAGAGATCAAAAATGTTTCAAAAAAAATGCTTTCTCAGGGAATTATTAATACAC
TTGCACTTGATCAACTTAATGAAGCTTCTTCACTTCAATTAATAGATTTAGGTGAGAAAGATTCTCCAAATAGATCATTA
GGTGCAAAAATATTATCAAATAGTTTTCATCAAAAAAGTAATTTAAAAATTGATAAACTAAAAACTAATATATTACTCGA
AAATCTAATCAATCAAGAAGGTATAAACACAATAAATGTTAAAGAGGGCAGTATAATATCAAGGAAAGGTAAGCCAATAA
CTTCACAAGAGTTTGATATCCTAGAACATTTTAATAAAGTAAGTCGAAGTCCTAGGCCCTTAAAGTGGTTAATTACCTTC
TCAGAATCCATGGGAAGTTGTGGATTACTTCTTATGATCATGAGAAGAGAAAAGCCTAGACTTCAGGCCAGGCACGGATT
ACTATCCTTAACTTTATTACTTGTAGTTCAACTAACAAAAGATTGGCTTGGGCCTATAGCAAGTCCCATGCAATTAATAT
TACCTCCCACATTGCTTCTTTCTCAAGGGATAGGCACCATAACATCATTGGCTTGGATGGCAGCTGCTAGTCTGATTTGG
CCATCATCTCTTGGTGAATCAATTGAAGTCAGACTAATAATTGCTTGTATCGCTGGTTCATTTATTGCATTTTTAGGCAG
AAGGATGAGAAGCCGAGCACAGGTTCTTCAAATAGCTGTATTTATTCCTTTTGGTGCATTATTAGGGCAATGGTTTATTC
TTAATCAGGTAATTAAAGAAAATAATATAGAATTTAACAATCTATCTATTGACCCTAATTCTCTTTTTAATGAGACCATT
ATTATTAGTTCAATATTAATGGTAACAATATTAATTATTCCAATTCTAGAAAATACATTTGGATTACTTACTAGAGCAAG
ATTAATGGAACTTGCTGATCAAGAACGTCCTTTACTTCGTAGATTATCTAGAGAAGCTCCAGGGACGTTTGAACATACTT
TAACAATTTTAAGCCTCGCCGAGGAAGGAGCAAGAGTTATTGGAGCTGATGTTGACTTAATAAGAACTGGGGCTTTATAC
CATGATGTAGGGAAATTGCATGCTCCAAATTGGTTTATTGAAAATCAGAAAGATGGAATAAACCCACACGATGAAATAAA
AAACCCTTATAAAAGTGCCGATATTCTTCAAGCCCATGTCGATGAAGGATTGAAGCTTGCGAGGAAATATCGACTTCCAT
CTCCTATTGCTGATTTCATCCCAGAGCATCAAGGTACTTTAAAGATGGGATATTTTCTTCATAAAGCTAGAGAAAGTGAT
CCTTCAGCCTCTGAAAAACGTTTTAGATATAAAGGACCTATTCCTCATTCAAAAGAAACTGGAATACTCATGCTTGCAGA
TGGCTGCGAAGCAGCATTAAGAGCTCTTGACTCTTCTTCTTCAGATAAAGATGCATGCAAAACAGTTAGAAAGATCATCC
AATCTCGTCAGGTTGACGGTCAATTAAAAGAAAGTAGTTTAACCAGAGCAGAAATAGAAATAATTCTTAGAGCCTTTGTC
TCTGTATGGAGGAGAATGCGTCACAGACGCTTAAAATACCCAAGCTTCAATCCAAGGTGA

Upstream 100 bases:

>100_bases
ATTACCCAGCCCACAAAAATTTTGGAGGATATGGTTGGGGAGTCAATCTCCCAGACGTCCAATACTTCGCTGGTCAGCCA
CTGACAAGTTAGGTCTACTA

Downstream 100 bases:

>100_bases
AAATCAAAAGACTTATTGAAATCTTAAGTATGAGTTAGAGTCTTATTCTTCTATGTCCTCTTCTACACCAGTAGATTAGA
GCTAATAAATTAAGCAGAGA

Product: HD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 659

Protein sequence:

>659_residues
MVCLLVAIFSSYKLLAVPDLKPGDIAQVNVIAPRDAKVIDTTDLKEKKQGLKESFVQSIDKNKSSDLEKTVSKQINILRT
QKFNNFGIDFNEFNITTLEKDWILNVKDNEWEEWKKEIKNVSKKMLSQGIINTLALDQLNEASSLQLIDLGEKDSPNRSL
GAKILSNSFHQKSNLKIDKLKTNILLENLINQEGINTINVKEGSIISRKGKPITSQEFDILEHFNKVSRSPRPLKWLITF
SESMGSCGLLLMIMRREKPRLQARHGLLSLTLLLVVQLTKDWLGPIASPMQLILPPTLLLSQGIGTITSLAWMAAASLIW
PSSLGESIEVRLIIACIAGSFIAFLGRRMRSRAQVLQIAVFIPFGALLGQWFILNQVIKENNIEFNNLSIDPNSLFNETI
IISSILMVTILIIPILENTFGLLTRARLMELADQERPLLRRLSREAPGTFEHTLTILSLAEEGARVIGADVDLIRTGALY
HDVGKLHAPNWFIENQKDGINPHDEIKNPYKSADILQAHVDEGLKLARKYRLPSPIADFIPEHQGTLKMGYFLHKARESD
PSASEKRFRYKGPIPHSKETGILMLADGCEAALRALDSSSSDKDACKTVRKIIQSRQVDGQLKESSLTRAEIEIILRAFV
SVWRRMRHRRLKYPSFNPR

Sequences:

>Translated_659_residues
MVCLLVAIFSSYKLLAVPDLKPGDIAQVNVIAPRDAKVIDTTDLKEKKQGLKESFVQSIDKNKSSDLEKTVSKQINILRT
QKFNNFGIDFNEFNITTLEKDWILNVKDNEWEEWKKEIKNVSKKMLSQGIINTLALDQLNEASSLQLIDLGEKDSPNRSL
GAKILSNSFHQKSNLKIDKLKTNILLENLINQEGINTINVKEGSIISRKGKPITSQEFDILEHFNKVSRSPRPLKWLITF
SESMGSCGLLLMIMRREKPRLQARHGLLSLTLLLVVQLTKDWLGPIASPMQLILPPTLLLSQGIGTITSLAWMAAASLIW
PSSLGESIEVRLIIACIAGSFIAFLGRRMRSRAQVLQIAVFIPFGALLGQWFILNQVIKENNIEFNNLSIDPNSLFNETI
IISSILMVTILIIPILENTFGLLTRARLMELADQERPLLRRLSREAPGTFEHTLTILSLAEEGARVIGADVDLIRTGALY
HDVGKLHAPNWFIENQKDGINPHDEIKNPYKSADILQAHVDEGLKLARKYRLPSPIADFIPEHQGTLKMGYFLHKARESD
PSASEKRFRYKGPIPHSKETGILMLADGCEAALRALDSSSSDKDACKTVRKIIQSRQVDGQLKESSLTRAEIEIILRAFV
SVWRRMRHRRLKYPSFNPR
>Mature_659_residues
MVCLLVAIFSSYKLLAVPDLKPGDIAQVNVIAPRDAKVIDTTDLKEKKQGLKESFVQSIDKNKSSDLEKTVSKQINILRT
QKFNNFGIDFNEFNITTLEKDWILNVKDNEWEEWKKEIKNVSKKMLSQGIINTLALDQLNEASSLQLIDLGEKDSPNRSL
GAKILSNSFHQKSNLKIDKLKTNILLENLINQEGINTINVKEGSIISRKGKPITSQEFDILEHFNKVSRSPRPLKWLITF
SESMGSCGLLLMIMRREKPRLQARHGLLSLTLLLVVQLTKDWLGPIASPMQLILPPTLLLSQGIGTITSLAWMAAASLIW
PSSLGESIEVRLIIACIAGSFIAFLGRRMRSRAQVLQIAVFIPFGALLGQWFILNQVIKENNIEFNNLSIDPNSLFNETI
IISSILMVTILIIPILENTFGLLTRARLMELADQERPLLRRLSREAPGTFEHTLTILSLAEEGARVIGADVDLIRTGALY
HDVGKLHAPNWFIENQKDGINPHDEIKNPYKSADILQAHVDEGLKLARKYRLPSPIADFIPEHQGTLKMGYFLHKARESD
PSASEKRFRYKGPIPHSKETGILMLADGCEAALRALDSSSSDKDACKTVRKIIQSRQVDGQLKESSLTRAEIEIILRAFV
SVWRRMRHRRLKYPSFNPR

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 74297; Mature: 74297

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCLLVAIFSSYKLLAVPDLKPGDIAQVNVIAPRDAKVIDTTDLKEKKQGLKESFVQSID
CHHHHEEHHHCCEEEECCCCCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHH
KNKSSDLEKTVSKQINILRTQKFNNFGIDFNEFNITTLEKDWILNVKDNEWEEWKKEIKN
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHH
VSKKMLSQGIINTLALDQLNEASSLQLIDLGEKDSPNRSLGAKILSNSFHQKSNLKIDKL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
KTNILLENLINQEGINTINVKEGSIISRKGKPITSQEFDILEHFNKVSRSPRPLKWLITF
HHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
SESMGSCGLLLMIMRREKPRLQARHGLLSLTLLLVVQLTKDWLGPIASPMQLILPPTLLL
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHCCHHHHH
SQGIGTITSLAWMAAASLIWPSSLGESIEVRLIIACIAGSFIAFLGRRMRSRAQVLQIAV
HCCCHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIPFGALLGQWFILNQVIKENNIEFNNLSIDPNSLFNETIIISSILMVTILIIPILENTF
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLTRARLMELADQERPLLRRLSREAPGTFEHTLTILSLAEEGARVIGADVDLIRTGALY
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEECCCHHHHHHCHHH
HDVGKLHAPNWFIENQKDGINPHDEIKNPYKSADILQAHVDEGLKLARKYRLPSPIADFI
HHHHHCCCCCCEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
PEHQGTLKMGYFLHKARESDPSASEKRFRYKGPIPHSKETGILMLADGCEAALRALDSSS
CCCCCCCHHHHHHHHHCCCCCCCHHCCEEECCCCCCCCCCCEEEEECCHHHHHHHHCCCC
SDKDACKTVRKIIQSRQVDGQLKESSLTRAEIEIILRAFVSVWRRMRHRRLKYPSFNPR
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVCLLVAIFSSYKLLAVPDLKPGDIAQVNVIAPRDAKVIDTTDLKEKKQGLKESFVQSID
CHHHHEEHHHCCEEEECCCCCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHH
KNKSSDLEKTVSKQINILRTQKFNNFGIDFNEFNITTLEKDWILNVKDNEWEEWKKEIKN
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHH
VSKKMLSQGIINTLALDQLNEASSLQLIDLGEKDSPNRSLGAKILSNSFHQKSNLKIDKL
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
KTNILLENLINQEGINTINVKEGSIISRKGKPITSQEFDILEHFNKVSRSPRPLKWLITF
HHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEE
SESMGSCGLLLMIMRREKPRLQARHGLLSLTLLLVVQLTKDWLGPIASPMQLILPPTLLL
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHCCHHHHH
SQGIGTITSLAWMAAASLIWPSSLGESIEVRLIIACIAGSFIAFLGRRMRSRAQVLQIAV
HCCCHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIPFGALLGQWFILNQVIKENNIEFNNLSIDPNSLFNETIIISSILMVTILIIPILENTF
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLTRARLMELADQERPLLRRLSREAPGTFEHTLTILSLAEEGARVIGADVDLIRTGALY
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEECCCHHHHHHCHHH
HDVGKLHAPNWFIENQKDGINPHDEIKNPYKSADILQAHVDEGLKLARKYRLPSPIADFI
HHHHHCCCCCCEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHC
PEHQGTLKMGYFLHKARESDPSASEKRFRYKGPIPHSKETGILMLADGCEAALRALDSSS
CCCCCCCHHHHHHHHHCCCCCCCHHCCEEECCCCCCCCCCCEEEEECCHHHHHHHHCCCC
SDKDACKTVRKIIQSRQVDGQLKESSLTRAEIEIILRAFVSVWRRMRHRRLKYPSFNPR
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]