| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026171
Identifier: 124026171
GI number: 124026171
Start: 1172364
End: 1172687
Strand: Reverse
Name: 124026171
Synonym: NATL1_14641
Alternate gene names: NA
Gene position: 1172687-1172364 (Counterclockwise)
Preceding gene: 124026172
Following gene: 124026170
Centisome position: 62.89
GC content: 40.74
Gene sequence:
>324_bases ATGGTTAAGAAATCTTCTTCGATTACAAAATCCAATTCTAATTGGTTATGGAGGTGGGCAGAACCTGAAAGCGAACTCTC AGTAATTCCGAAATCAAAAACTAAACGCTTGGCCCAACAGGCAAAGTTGGCAAATGTTGATGCAGAGAGGGCTGTTACTA GGGCATACCAAATTGAATTGTCAAGAACGAAGGCAATTGGAGAGGCAATGTTTAAGTCTGGAAAAGCATTGAGGTTTACT CTTTCTAGTTCTGGAAGGCAGTTAATTCTCAGAACACAGGCAGCACGAAGGCAGTTTGAACCTGGTTTTAGGGATAAGAA ATAA
Upstream 100 bases:
>100_bases TTTTCATTTTTTTTTGGATTTTCAATCCTTTTTTCTTGCCTGTAGCGGTTAAGGTCTTTATGAGTCATCAAATGGCTCTT CGTTTTATGGGAATGGGAGT
Downstream 100 bases:
>100_bases TTTTCAGATAGAATAAAAGCCCTACGAAAAATAAAAAAATGCAGCTGTATATAGTTACTTGGAAATTCGAATCTTCTGAG GATCAAAATTATTCATCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MVKKSSSITKSNSNWLWRWAEPESELSVIPKSKTKRLAQQAKLANVDAERAVTRAYQIELSRTKAIGEAMFKSGKALRFT LSSSGRQLILRTQAARRQFEPGFRDKK
Sequences:
>Translated_107_residues MVKKSSSITKSNSNWLWRWAEPESELSVIPKSKTKRLAQQAKLANVDAERAVTRAYQIELSRTKAIGEAMFKSGKALRFT LSSSGRQLILRTQAARRQFEPGFRDKK >Mature_107_residues MVKKSSSITKSNSNWLWRWAEPESELSVIPKSKTKRLAQQAKLANVDAERAVTRAYQIELSRTKAIGEAMFKSGKALRFT LSSSGRQLILRTQAARRQFEPGFRDKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12184; Mature: 12184
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKSSSITKSNSNWLWRWAEPESELSVIPKSKTKRLAQQAKLANVDAERAVTRAYQIEL CCCCCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SRTKAIGEAMFKSGKALRFTLSSSGRQLILRTQAARRQFEPGFRDKK HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECHHHHHHCCCCCCCCC >Mature Secondary Structure MVKKSSSITKSNSNWLWRWAEPESELSVIPKSKTKRLAQQAKLANVDAERAVTRAYQIEL CCCCCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SRTKAIGEAMFKSGKALRFTLSSSGRQLILRTQAARRQFEPGFRDKK HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA