| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124026033
Identifier: 124026033
GI number: 124026033
Start: 1112296
End: 1112922
Strand: Direct
Name: 124026033
Synonym: NATL1_13261
Alternate gene names: NA
Gene position: 1112296-1112922 (Clockwise)
Preceding gene: 124026032
Following gene: 124026034
Centisome position: 59.65
GC content: 31.9
Gene sequence:
>627_bases ATGAATATATCTAAATTCTTATTAATTGATGCTGTATTAGTAATTGCAGCAATCCCACTTCTATTTTTTGTTTCAAGTGG CAAAAGAAAATCTCCTTTTTTACGAAGTTCAAGTAAAGAAGAATTATTGAGAAAGGCCTCATGCAAACTCCCTGACAAAG AAAAACTTAGAGAACTTGAAAAATTTGCAATAAAACAAGGAAGTGGAATTGAATTCGATTCAATTATTGGAATTTGGAAA TTTATATCAATATGGAAAAAAGACATCGACGAAGAAGATCCTGTTTTTAGTTCATTGCTTAGAGTCTTCTCTGCAAAAAT AGAGTTCAAAAAAGACCTTTTTATTGAAAATTCAACTGAATTGTCTGTTATCGCCTCAATTCAATTTGGACTGTTCAGCA TAGGGTTTTCAGGAACTGGTTATTTAAAAGGAAAACAACCTTCATTACCATTCTGTTTAAATCTAATTGAACTCAAATCA GGTTCAAATATTTTATTGAGAAGATCTCTTAAAGCACCGGAAGACAAGGAGAAGTCATTTTTTGCCATGATTGCATTAGA AGAAAACGACAAATTACTTTCAGCCAGAGGTCAAGGAGGTGAAGTCGTAATTTGGTTGAAAGATTGA
Upstream 100 bases:
>100_bases TTGTAACTGTTAAGTCCTATATCTCAAACTCTATGCAAAACCTATTAGAGGTTTATAAAGAAATAACTGTTTACTACTTA TCTTCACGTAGCTCCGCGAA
Downstream 100 bases:
>100_bases ATTCAGGAGTAAAGAAGATCAGATTAATCTTGATAGTGATTCATGAATTTTGTATAACCTTCTATTTGGACGCATTTTAA TTGAATACTGTTTAAGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNISKFLLIDAVLVIAAIPLLFFVSSGKRKSPFLRSSSKEELLRKASCKLPDKEKLRELEKFAIKQGSGIEFDSIIGIWK FISIWKKDIDEEDPVFSSLLRVFSAKIEFKKDLFIENSTELSVIASIQFGLFSIGFSGTGYLKGKQPSLPFCLNLIELKS GSNILLRRSLKAPEDKEKSFFAMIALEENDKLLSARGQGGEVVIWLKD
Sequences:
>Translated_208_residues MNISKFLLIDAVLVIAAIPLLFFVSSGKRKSPFLRSSSKEELLRKASCKLPDKEKLRELEKFAIKQGSGIEFDSIIGIWK FISIWKKDIDEEDPVFSSLLRVFSAKIEFKKDLFIENSTELSVIASIQFGLFSIGFSGTGYLKGKQPSLPFCLNLIELKS GSNILLRRSLKAPEDKEKSFFAMIALEENDKLLSARGQGGEVVIWLKD >Mature_208_residues MNISKFLLIDAVLVIAAIPLLFFVSSGKRKSPFLRSSSKEELLRKASCKLPDKEKLRELEKFAIKQGSGIEFDSIIGIWK FISIWKKDIDEEDPVFSSLLRVFSAKIEFKKDLFIENSTELSVIASIQFGLFSIGFSGTGYLKGKQPSLPFCLNLIELKS GSNILLRRSLKAPEDKEKSFFAMIALEENDKLLSARGQGGEVVIWLKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23386; Mature: 23386
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISKFLLIDAVLVIAAIPLLFFVSSGKRKSPFLRSSSKEELLRKASCKLPDKEKLRELE CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH KFAIKQGSGIEFDSIIGIWKFISIWKKDIDEEDPVFSSLLRVFSAKIEFKKDLFIENSTE HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCC LSVIASIQFGLFSIGFSGTGYLKGKQPSLPFCLNLIELKSGSNILLRRSLKAPEDKEKSF EEEEEEEHHHHEEECCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCE FAMIALEENDKLLSARGQGGEVVIWLKD EEEEEECCCCCEEEECCCCCEEEEEEEC >Mature Secondary Structure MNISKFLLIDAVLVIAAIPLLFFVSSGKRKSPFLRSSSKEELLRKASCKLPDKEKLRELE CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH KFAIKQGSGIEFDSIIGIWKFISIWKKDIDEEDPVFSSLLRVFSAKIEFKKDLFIENSTE HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCC LSVIASIQFGLFSIGFSGTGYLKGKQPSLPFCLNLIELKSGSNILLRRSLKAPEDKEKSF EEEEEEEHHHHEEECCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCE FAMIALEENDKLLSARGQGGEVVIWLKD EEEEEECCCCCEEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA