| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025863
Identifier: 124025863
GI number: 124025863
Start: 1032677
End: 1033939
Strand: Reverse
Name: 124025863
Synonym: NATL1_11561
Alternate gene names: NA
Gene position: 1033939-1032677 (Counterclockwise)
Preceding gene: 124025864
Following gene: 124025862
Centisome position: 55.45
GC content: 38.08
Gene sequence:
>1263_bases ATGCGATTATCGGCTTTGCAACAATATGGAATCGTAACGACCAACTATTGGGCATTCACACTGACAGATGGTGCTCTAAG AATGCTAGTGATTTTTCACTTTCATAGCCTTGGATATACAACATTAGAAATCGCATTCTTATTCCTTTTTTATGAGTTCT TTGGCGTTATCACTAATCTCTATGGAGGATGGATAGGAGCAAGGTATGGATTACGTCTAACACTTTGGGTCGGGACTCTT TTACAAATCGGTGCCTTATTGATGTTGATACCCGTTTCGAGTGGTTGGTCGAAACTTTTGAGTGTCATCTATGTCATGGT TGCTCAAGCAATTAGTGGTATAGCAAAAGATCTCAATAAGATGAGTGCTAAAAGTGCCATCAAAACTGTCGTTCCAGACT CCTCAGGAGATGATGGTGGGAATAATCAACTATTTAAATGGGTAGCCATCTTAACTGGTTCCAAAAATGCACTCAAAGGA GTTGGCTTCTTTCTTGGTGGATTGTTGCTGACCAGTTTCGGTTTTAATAAAGCAGTTGAATTTATGGCAATCGGATTAGG TGTTTCGTTTTTATTGACATTGATTTTGCCTGGAGATATTGGAAAGATGAAAAGCAAACCTATCTTTAAAGACTTATTCT CTAAATCTCAAGGTATCAACGTCCTATCTTTTGCACGTTTTTTTCTCTTTGGAGCAAGAGATGTATGGTTCGTCGTAGCA CTTCCTGTTTTTCTTGAAACGTATTTAAATTGGAATTTTTCTGAGATTGGAGCGTTCCTAGGATTGTGGGTTATTGGTTA TGGCTTTATCCAAGCGTTTGCACCGTCTTTAAGAAATTTATGGGGAAAGAAAACAAGTCCAGGAGTTTCTTCTGTTCAAT TTTGGAGTGCAGTCTTAACTGCGATACCTGCTCTAATAGCAATAGCACTATGGCGACAAAGCAATCCAGAAATAGCAATT ACCGTTGGATTAATACTATTTGGATTCATTTTTGCAATGAACTCATCGATACATTCATATATGGTTCTTGCCTATACGGA CAAGGAAAACGTAAGTCTAAACGTAGGCTTCTATTACATGGCAAATGCTGCAGGGAGACTGATTGGTACTCTCCTATCAG GAGTTTTATTCATGCTTGGAACTAATGCATCTATAGGGATGCAATTATGTTTATGGTGTTCAAGCTTATTTGTATTTATC TCATTGTTGACTAGTTTACGACTACCACCAGTTTCAAGTGCTATAGCTATTGAAAAAGCCTAA
Upstream 100 bases:
>100_bases AAAGTCTATATTTGGTATGACAATGAATGGGGTTATAGCTGTCGAATGGCAGATCTCGTCTGCCATGTCATAAATCTTGA AAAGGATTAAAAATAAGAAC
Downstream 100 bases:
>100_bases TATTCTTATACCAAAAGATTACCTTATCTATTTCTATAGGATATTTTTTAGTGATAGTGAGCCCAACATTTTCTGAACTG AGTTCAATTTTTCTGAGAAT
Product: major facilitator superfamily multidrug-efflux transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MRLSALQQYGIVTTNYWAFTLTDGALRMLVIFHFHSLGYTTLEIAFLFLFYEFFGVITNLYGGWIGARYGLRLTLWVGTL LQIGALLMLIPVSSGWSKLLSVIYVMVAQAISGIAKDLNKMSAKSAIKTVVPDSSGDDGGNNQLFKWVAILTGSKNALKG VGFFLGGLLLTSFGFNKAVEFMAIGLGVSFLLTLILPGDIGKMKSKPIFKDLFSKSQGINVLSFARFFLFGARDVWFVVA LPVFLETYLNWNFSEIGAFLGLWVIGYGFIQAFAPSLRNLWGKKTSPGVSSVQFWSAVLTAIPALIAIALWRQSNPEIAI TVGLILFGFIFAMNSSIHSYMVLAYTDKENVSLNVGFYYMANAAGRLIGTLLSGVLFMLGTNASIGMQLCLWCSSLFVFI SLLTSLRLPPVSSAIAIEKA
Sequences:
>Translated_420_residues MRLSALQQYGIVTTNYWAFTLTDGALRMLVIFHFHSLGYTTLEIAFLFLFYEFFGVITNLYGGWIGARYGLRLTLWVGTL LQIGALLMLIPVSSGWSKLLSVIYVMVAQAISGIAKDLNKMSAKSAIKTVVPDSSGDDGGNNQLFKWVAILTGSKNALKG VGFFLGGLLLTSFGFNKAVEFMAIGLGVSFLLTLILPGDIGKMKSKPIFKDLFSKSQGINVLSFARFFLFGARDVWFVVA LPVFLETYLNWNFSEIGAFLGLWVIGYGFIQAFAPSLRNLWGKKTSPGVSSVQFWSAVLTAIPALIAIALWRQSNPEIAI TVGLILFGFIFAMNSSIHSYMVLAYTDKENVSLNVGFYYMANAAGRLIGTLLSGVLFMLGTNASIGMQLCLWCSSLFVFI SLLTSLRLPPVSSAIAIEKA >Mature_420_residues MRLSALQQYGIVTTNYWAFTLTDGALRMLVIFHFHSLGYTTLEIAFLFLFYEFFGVITNLYGGWIGARYGLRLTLWVGTL LQIGALLMLIPVSSGWSKLLSVIYVMVAQAISGIAKDLNKMSAKSAIKTVVPDSSGDDGGNNQLFKWVAILTGSKNALKG VGFFLGGLLLTSFGFNKAVEFMAIGLGVSFLLTLILPGDIGKMKSKPIFKDLFSKSQGINVLSFARFFLFGARDVWFVVA LPVFLETYLNWNFSEIGAFLGLWVIGYGFIQAFAPSLRNLWGKKTSPGVSSVQFWSAVLTAIPALIAIALWRQSNPEIAI TVGLILFGFIFAMNSSIHSYMVLAYTDKENVSLNVGFYYMANAAGRLIGTLLSGVLFMLGTNASIGMQLCLWCSSLFVFI SLLTSLRLPPVSSAIAIEKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45912; Mature: 45912
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSALQQYGIVTTNYWAFTLTDGALRMLVIFHFHSLGYTTLEIAFLFLFYEFFGVITNL CCCHHHHHCCCEEECEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH YGGWIGARYGLRLTLWVGTLLQIGALLMLIPVSSGWSKLLSVIYVMVAQAISGIAKDLNK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MSAKSAIKTVVPDSSGDDGGNNQLFKWVAILTGSKNALKGVGFFLGGLLLTSFGFNKAVE HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH FMAIGLGVSFLLTLILPGDIGKMKSKPIFKDLFSKSQGINVLSFARFFLFGARDVWFVVA HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH LPVFLETYLNWNFSEIGAFLGLWVIGYGFIQAFAPSLRNLWGKKTSPGVSSVQFWSAVLT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AIPALIAIALWRQSNPEIAITVGLILFGFIFAMNSSIHSYMVLAYTDKENVSLNVGFYYM HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEHEEE ANAAGRLIGTLLSGVLFMLGTNASIGMQLCLWCSSLFVFISLLTSLRLPPVSSAIAIEKA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC >Mature Secondary Structure MRLSALQQYGIVTTNYWAFTLTDGALRMLVIFHFHSLGYTTLEIAFLFLFYEFFGVITNL CCCHHHHHCCCEEECEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH YGGWIGARYGLRLTLWVGTLLQIGALLMLIPVSSGWSKLLSVIYVMVAQAISGIAKDLNK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MSAKSAIKTVVPDSSGDDGGNNQLFKWVAILTGSKNALKGVGFFLGGLLLTSFGFNKAVE HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH FMAIGLGVSFLLTLILPGDIGKMKSKPIFKDLFSKSQGINVLSFARFFLFGARDVWFVVA HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH LPVFLETYLNWNFSEIGAFLGLWVIGYGFIQAFAPSLRNLWGKKTSPGVSSVQFWSAVLT HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AIPALIAIALWRQSNPEIAITVGLILFGFIFAMNSSIHSYMVLAYTDKENVSLNVGFYYM HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEHEEE ANAAGRLIGTLLSGVLFMLGTNASIGMQLCLWCSSLFVFISLLTSLRLPPVSSAIAIEKA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA