| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is wecC [H]
Identifier: 124025571
GI number: 124025571
Start: 795754
End: 796965
Strand: Reverse
Name: wecC [H]
Synonym: NATL1_08641
Alternate gene names: 124025571
Gene position: 796965-795754 (Counterclockwise)
Preceding gene: 124025572
Following gene: 124025570
Centisome position: 42.74
GC content: 29.62
Gene sequence:
>1212_bases ATGGCAAAAGTATGTGTCATTGGTCTAGGGTACATAGGTCTTCCGACTGCTGTTGTCTTAGCTAAAGCAGGTCACAGTAC ATTAGGAATTGATATAGACCCACATGTCGTTAAAAATGTAAACAATGGAGTTACTCATTTTAGAGAGCCTAATTTAAACA GTTCATTAATATCAGTTGTATCTAATGGAATGCTACGTGCTTCTGAAAAGATAAAGGATGCTGATATATTTATAATTGCT GTTCCTACACCATTCAGAAAAACAAATAACAAAAATCCAGTTCCTAATCTAGATTATGTTATCTCTGCAATAAATTCTAT TTTACCTTTTATTAGGAAAGGAAACAGTATAGTAATAGAGTCAACATGTCCAATAGGGACAACAGCTAAAGTAAAAAATA TTATTATTGAGAATACTAAGTTAAAAGAAAATGATTTTAATCTTGCATACTGCCCAGAAAGAGTTATACCTGGAAATATT ATGGTTGAACTAATAAATAATGATAGAGTTATTGGTAGTCATAATAATCAGTCAAAAGAAAAGATAATTAATTTTTATAA AACTTTTTGTAAGGGTAATATTTTATCTACAACTGCTGAAACAGCTGAAATGGTTAAACTAACAGAAAACTCATTTAGAG ATGTAAATATTGCTTTTGCTAATGAATTATCCATTATAAGTGATCATATAAATATTGACGTTATCGAACTGATTAAATTA GCCAATTTTCACCCAAGAGTTAACATACTAAAACCTGGTTGTGGTGTAGGAGGACATTGCATTGCAGTAGACCCTTGGTT TATCGCTTCAGAAGTCCCCGAAAAATCCCAATTAATACAAACCGCTAGAAAGATTAATGACTATAAGCCTCAATGGGTTA TAGAAAAAATAACTAAAAAGGCTCGTGAACTTAAATCTACTCTTAGAAAAGATCCAATTATTGGCTGCTTAGGTATTACA TTTAAACCAAATGTAGATGATTTAAGAGAATCCCCTGCACTAAAGATAGTTCAAGGTCTTGATAAAACTCAACTAAAATT GATTGTAGCTGATCCTAATATTAAAAGTCATAATGAATTAAGTATATCTCCACTAAATAATTTAATTAATAATAGTGATC TTTATGTTTTCTTAGTGGCTCATAATGAATTTAAATATATTTCATTAAAGAATAGAGAATATTTAGATTTTTGCGGAGTA ATAAATAAATAA
Upstream 100 bases:
>100_bases AAACATTATTCATTAACAATTTACCTATTAATGTTAAGGTCATAATCCCTGAGGCCTATAATTCTAGATATCTAGAATTA TAGGCTTTTTTATAAAATTC
Downstream 100 bases:
>100_bases CTTGAAAAGACTATTAATAACATTATATGATATTGGCCTGAAAAGGCTTTTTCAAAGATTATTATATGATTTCAAAAAAT CTATAAATAAACTTTTACCA
Product: UDP-glucose 6-dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MAKVCVIGLGYIGLPTAVVLAKAGHSTLGIDIDPHVVKNVNNGVTHFREPNLNSSLISVVSNGMLRASEKIKDADIFIIA VPTPFRKTNNKNPVPNLDYVISAINSILPFIRKGNSIVIESTCPIGTTAKVKNIIIENTKLKENDFNLAYCPERVIPGNI MVELINNDRVIGSHNNQSKEKIINFYKTFCKGNILSTTAETAEMVKLTENSFRDVNIAFANELSIISDHINIDVIELIKL ANFHPRVNILKPGCGVGGHCIAVDPWFIASEVPEKSQLIQTARKINDYKPQWVIEKITKKARELKSTLRKDPIIGCLGIT FKPNVDDLRESPALKIVQGLDKTQLKLIVADPNIKSHNELSISPLNNLINNSDLYVFLVAHNEFKYISLKNREYLDFCGV INK
Sequences:
>Translated_403_residues MAKVCVIGLGYIGLPTAVVLAKAGHSTLGIDIDPHVVKNVNNGVTHFREPNLNSSLISVVSNGMLRASEKIKDADIFIIA VPTPFRKTNNKNPVPNLDYVISAINSILPFIRKGNSIVIESTCPIGTTAKVKNIIIENTKLKENDFNLAYCPERVIPGNI MVELINNDRVIGSHNNQSKEKIINFYKTFCKGNILSTTAETAEMVKLTENSFRDVNIAFANELSIISDHINIDVIELIKL ANFHPRVNILKPGCGVGGHCIAVDPWFIASEVPEKSQLIQTARKINDYKPQWVIEKITKKARELKSTLRKDPIIGCLGIT FKPNVDDLRESPALKIVQGLDKTQLKLIVADPNIKSHNELSISPLNNLINNSDLYVFLVAHNEFKYISLKNREYLDFCGV INK >Mature_402_residues AKVCVIGLGYIGLPTAVVLAKAGHSTLGIDIDPHVVKNVNNGVTHFREPNLNSSLISVVSNGMLRASEKIKDADIFIIAV PTPFRKTNNKNPVPNLDYVISAINSILPFIRKGNSIVIESTCPIGTTAKVKNIIIENTKLKENDFNLAYCPERVIPGNIM VELINNDRVIGSHNNQSKEKIINFYKTFCKGNILSTTAETAEMVKLTENSFRDVNIAFANELSIISDHINIDVIELIKLA NFHPRVNILKPGCGVGGHCIAVDPWFIASEVPEKSQLIQTARKINDYKPQWVIEKITKKARELKSTLRKDPIIGCLGITF KPNVDDLRESPALKIVQGLDKTQLKLIVADPNIKSHNELSISPLNNLINNSDLYVFLVAHNEFKYISLKNREYLDFCGVI NK
Specific function: Probably involved in the synthesis of sugar components of EPS I, by converting NDP-N-acetyl-D-galactosamine into NDP-N- acetyl-D-galactosaminuronic acid [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=372, Percent_Identity=26.6129032258064, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI296040438, Length=255, Percent_Identity=27.4509803921569, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI48994968, Length=416, Percent_Identity=45.6730769230769, Blast_Score=362, Evalue=1e-101, Organism=Escherichia coli, GI1788340, Length=361, Percent_Identity=23.5457063711911, Blast_Score=97, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17560350, Length=380, Percent_Identity=26.5789473684211, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI17136908, Length=374, Percent_Identity=29.4117647058824, Blast_Score=115, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 44756; Mature: 44624
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVCVIGLGYIGLPTAVVLAKAGHSTLGIDIDPHVVKNVNNGVTHFREPNLNSSLISVV CCEEEEEECCHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCHHHHHHH SNGMLRASEKIKDADIFIIAVPTPFRKTNNKNPVPNLDYVISAINSILPFIRKGNSIVIE HCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE STCPIGTTAKVKNIIIENTKLKENDFNLAYCPERVIPGNIMVELINNDRVIGSHNNQSKE CCCCCCCCHHHHHEEEECCEECCCCCCEEECCCCCCCCCEEEEEECCCEEEECCCCHHHH KIINFYKTFCKGNILSTTAETAEMVKLTENSFRDVNIAFANELSIISDHINIDVIELIKL HHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCCHHHHHHHH ANFHPRVNILKPGCGVGGHCIAVDPWFIASEVPEKSQLIQTARKINDYKPQWVIEKITKK HCCCCCEEEECCCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH ARELKSTLRKDPIIGCLGITFKPNVDDLRESPALKIVQGLDKTQLKLIVADPNIKSHNEL HHHHHHHHHCCCCEEEEEEEECCCHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCCCCCE SISPLNNLINNSDLYVFLVAHNEFKYISLKNREYLDFCGVINK EECHHHHHCCCCCEEEEEEEECCEEEEEECCCCHHHHHCCCCC >Mature Secondary Structure AKVCVIGLGYIGLPTAVVLAKAGHSTLGIDIDPHVVKNVNNGVTHFREPNLNSSLISVV CEEEEEECCHHHHHHHHHHHHCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCHHHHHHH SNGMLRASEKIKDADIFIIAVPTPFRKTNNKNPVPNLDYVISAINSILPFIRKGNSIVIE HCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE STCPIGTTAKVKNIIIENTKLKENDFNLAYCPERVIPGNIMVELINNDRVIGSHNNQSKE CCCCCCCCHHHHHEEEECCEECCCCCCEEECCCCCCCCCEEEEEECCCEEEECCCCHHHH KIINFYKTFCKGNILSTTAETAEMVKLTENSFRDVNIAFANELSIISDHINIDVIELIKL HHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCCHHHHHHHH ANFHPRVNILKPGCGVGGHCIAVDPWFIASEVPEKSQLIQTARKINDYKPQWVIEKITKK HCCCCCEEEECCCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH ARELKSTLRKDPIIGCLGITFKPNVDDLRESPALKIVQGLDKTQLKLIVADPNIKSHNEL HHHHHHHHHCCCCEEEEEEEECCCHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCCCCCE SISPLNNLINNSDLYVFLVAHNEFKYISLKNREYLDFCGVINK EECHHHHHCCCCCEEEEEEEECCEEEEEECCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]