| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025176
Identifier: 124025176
GI number: 124025176
Start: 424495
End: 424806
Strand: Direct
Name: 124025176
Synonym: NATL1_04631
Alternate gene names: NA
Gene position: 424495-424806 (Clockwise)
Preceding gene: 124025175
Following gene: 124025177
Centisome position: 22.76
GC content: 30.77
Gene sequence:
>312_bases ATGAACTCAGAGGTATTGATCTTATATTCACGTAAAGGCTGCTGCTTGTGTCAAACACTTGAAAAAAAATTATCTAGGAT ATGTCTAGATAATTTAAACCCTTCTATTGAACTTACCATTGTCGACATAGATAGTAAAACAGTGTCTTTAGATATACAAA TGAAGTATACAAATGAAGTTCCAGTCATAGTTCTTGACTCAACTAGATTGTTAAAAAAGATTGAATTGCCTCGGGTCTCA CCACGTTTAAAGGAAGACATGCTTTTATCTTGGATACAAAAGAATTTGAATATTTTGTATAAAAAAGTTTAA
Upstream 100 bases:
>100_bases TTAATAAGCATGGTCCGTGGAGAGGGGGGTGGCTGACCTTGAAAAGATTAAGTAAATGTCATCCATTTACCCCATGTGGG TGTGACCCAGTTCCAGAAAA
Downstream 100 bases:
>100_bases GAAAATAACCAATTCTTCTTTTTAATAAAGTTCTTTATTGATTTCAAAGAGAAAAACATAATTTATTTTTTTAATAACTA AAATTATTTTATGAAGAAGA
Product: thioredoxin family protein
Products: NA
Alternate protein names: Ribonucleotide Reductase
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MNSEVLILYSRKGCCLCQTLEKKLSRICLDNLNPSIELTIVDIDSKTVSLDIQMKYTNEVPVIVLDSTRLLKKIELPRVS PRLKEDMLLSWIQKNLNILYKKV
Sequences:
>Translated_103_residues MNSEVLILYSRKGCCLCQTLEKKLSRICLDNLNPSIELTIVDIDSKTVSLDIQMKYTNEVPVIVLDSTRLLKKIELPRVS PRLKEDMLLSWIQKNLNILYKKV >Mature_103_residues MNSEVLILYSRKGCCLCQTLEKKLSRICLDNLNPSIELTIVDIDSKTVSLDIQMKYTNEVPVIVLDSTRLLKKIELPRVS PRLKEDMLLSWIQKNLNILYKKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11921; Mature: 11921
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEVLILYSRKGCCLCQTLEKKLSRICLDNLNPSIELTIVDIDSKTVSLDIQMKYTNEV CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEEEECCCC PVIVLDSTRLLKKIELPRVSPRLKEDMLLSWIQKNLNILYKKV CEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MNSEVLILYSRKGCCLCQTLEKKLSRICLDNLNPSIELTIVDIDSKTVSLDIQMKYTNEV CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEEEECCCC PVIVLDSTRLLKKIELPRVSPRLKEDMLLSWIQKNLNILYKKV CEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA