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The map label for this gene is miaE [H]

Identifier: 124025152

GI number: 124025152

Start: 402887

End: 403501

Strand: Direct

Name: miaE [H]

Synonym: NATL1_04391

Alternate gene names: 124025152

Gene position: 402887-403501 (Clockwise)

Preceding gene: 124025151

Following gene: 124025153

Centisome position: 21.61

GC content: 38.86

Gene sequence:

>615_bases
ATGGATAATTCAATATCTCAAATTGCAGGGCCATCAAAGATTCGCTGGCTAATAAATAAAACTTCTGAAGATTGGGTTGA
TCTTGCAATTTCTAACCCGATGGAAATTCTTTTGGATCATGCACATTGTGAAAGAAAGGCCGCTGGTGTAGCTCTGCAAC
TTATGTTTCGTTATGTCAGTGAACCGGGGCTTTCAGAGGTCCTAAGCCCATTAGCACGTGAGGAGCTTGAACATTTTGAG
AGAGTTTTGTCTATTTTAAATACGCGTGGGAAAAAACTTCAAAAATTAGCCTCACCTCCTTATGGAGCGACTCTGGCAAA
AAATATTTGCAAAGATGAACCATTGCGAATGTTGGATAGCTTTCTAGTAGCCGGACTTATTGAGGCAAGAAGTCATGAAA
GAATGAAATTATTGTCTATACATTCTCCTGATATAGAACTTCGTAATTTATACGCCGACTTACTCAAAAGCGAGGCTAGG
CATTTTGGAATTTATTGGAAGTTGGCAGATGAACGCTTTGAACGAAATCTTCTTACTTCTAGGCTAGAAGAATTAGCTAA
GGTTGAATCTGATGCTTTATTGGAAATGCATCATCTGCCAAGGATGCATAGTTAA

Upstream 100 bases:

>100_bases
TCAGATAAAGCATTGGGTTTGGTTTGTGGCTTTGGAGCAAATAGTTATCAACTTGCTTTAGAAGGCATAGTTTCCTATTT
AAAGCGAGTATGAGAGGTTT

Downstream 100 bases:

>100_bases
TTATCTCTTTTAAGTAGACAGAAGTTACCCAATCAAATGAAAGTTTTGACTATTGCTGGCGTAGGGCCAGGTGATCCTTC
TTTATTAACTTTGGCAGCAG

Product: putative tRNA-(MS[2]IO[6]A)-hydroxylase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MDNSISQIAGPSKIRWLINKTSEDWVDLAISNPMEILLDHAHCERKAAGVALQLMFRYVSEPGLSEVLSPLAREELEHFE
RVLSILNTRGKKLQKLASPPYGATLAKNICKDEPLRMLDSFLVAGLIEARSHERMKLLSIHSPDIELRNLYADLLKSEAR
HFGIYWKLADERFERNLLTSRLEELAKVESDALLEMHHLPRMHS

Sequences:

>Translated_204_residues
MDNSISQIAGPSKIRWLINKTSEDWVDLAISNPMEILLDHAHCERKAAGVALQLMFRYVSEPGLSEVLSPLAREELEHFE
RVLSILNTRGKKLQKLASPPYGATLAKNICKDEPLRMLDSFLVAGLIEARSHERMKLLSIHSPDIELRNLYADLLKSEAR
HFGIYWKLADERFERNLLTSRLEELAKVESDALLEMHHLPRMHS
>Mature_204_residues
MDNSISQIAGPSKIRWLINKTSEDWVDLAISNPMEILLDHAHCERKAAGVALQLMFRYVSEPGLSEVLSPLAREELEHFE
RVLSILNTRGKKLQKLASPPYGATLAKNICKDEPLRMLDSFLVAGLIEARSHERMKLLSIHSPDIELRNLYADLLKSEAR
HFGIYWKLADERFERNLLTSRLEELAKVESDALLEMHHLPRMHS

Specific function: Production of the modified nucleoside 2-methylthio-cis- ribozeatin (MS[2]IO[6]A) found in some tRNAs. Catalyzes the oxygen-dependent transformation of MS[2]I[6]A into MS[2]IO[6]A [H]

COG id: COG4445

COG function: function code FJ; Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR010386 [H]

Pfam domain/function: PF06175 MiaE [H]

EC number: NA

Molecular weight: Translated: 23361; Mature: 23361

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSISQIAGPSKIRWLINKTSEDWVDLAISNPMEILLDHAHCERKAAGVALQLMFRYVS
CCCCHHHHCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EPGLSEVLSPLAREELEHFERVLSILNTRGKKLQKLASPPYGATLAKNICKDEPLRMLDS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHH
FLVAGLIEARSHERMKLLSIHSPDIELRNLYADLLKSEARHFGIYWKLADERFERNLLTS
HHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH
RLEELAKVESDALLEMHHLPRMHS
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDNSISQIAGPSKIRWLINKTSEDWVDLAISNPMEILLDHAHCERKAAGVALQLMFRYVS
CCCCHHHHCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EPGLSEVLSPLAREELEHFERVLSILNTRGKKLQKLASPPYGATLAKNICKDEPLRMLDS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHH
FLVAGLIEARSHERMKLLSIHSPDIELRNLYADLLKSEARHFGIYWKLADERFERNLLTS
HHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHH
RLEELAKVESDALLEMHHLPRMHS
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253666; 11677609 [H]