| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025142
Identifier: 124025142
GI number: 124025142
Start: 399182
End: 399553
Strand: Direct
Name: 124025142
Synonym: NATL1_04291
Alternate gene names: NA
Gene position: 399182-399553 (Clockwise)
Preceding gene: 124025139
Following gene: 124025143
Centisome position: 21.41
GC content: 40.86
Gene sequence:
>372_bases ATGCTAAATAGTATATTTGTATCAGTTGAGTCCCCGTCGCAAAGGGCAAAGAAGCCACCAGTGAGCAGGTGGTTTCTTTT TTCTTTAATTAGGAGAATGAACCAACCAGTAAGAGAAGCATTACCAACTCCAGCAGGATGGTTGGTCGCACCTGCCAGAG ACTTTTGTTTGTTTTTTATTCGTGACCCTAAATCTGTCATGGTTGCACCAACTGTCTTAACTCAACTTTGGTATTGCACC GAACAAGGTATCCCAACCCAATTGAAAAATACGAGAAGACTGGACTATGAATCTGCACATGAAACTTGGAATGAACTGCT ATCTAATGATTGGGAATTAGTTGAACATCAGATTAATGATGCAGCTGCATAG
Upstream 100 bases:
>100_bases AGGGTGGAAAGTTCAGATGGATACAAAAGTGCTGAACTCAAAAGGGGCGACCAAAATCTCGCCCCTTCTTTAATGGAAAA ATTAGTCACTTGACTAACTA
Downstream 100 bases:
>100_bases CGGGAACATTGATCTAGGAATATCGCGACTAAGTGCAAGAATATCTATCTAGTACTTGACCCTGCTATTTAATTTCGATA TCTCCCAGCGTGACATCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MLNSIFVSVESPSQRAKKPPVSRWFLFSLIRRMNQPVREALPTPAGWLVAPARDFCLFFIRDPKSVMVAPTVLTQLWYCT EQGIPTQLKNTRRLDYESAHETWNELLSNDWELVEHQINDAAA
Sequences:
>Translated_123_residues MLNSIFVSVESPSQRAKKPPVSRWFLFSLIRRMNQPVREALPTPAGWLVAPARDFCLFFIRDPKSVMVAPTVLTQLWYCT EQGIPTQLKNTRRLDYESAHETWNELLSNDWELVEHQINDAAA >Mature_123_residues MLNSIFVSVESPSQRAKKPPVSRWFLFSLIRRMNQPVREALPTPAGWLVAPARDFCLFFIRDPKSVMVAPTVLTQLWYCT EQGIPTQLKNTRRLDYESAHETWNELLSNDWELVEHQINDAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14229; Mature: 14229
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNSIFVSVESPSQRAKKPPVSRWFLFSLIRRMNQPVREALPTPAGWLVAPARDFCLFFI CCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCEEEECCCCEEEEEE RDPKSVMVAPTVLTQLWYCTEQGIPTQLKNTRRLDYESAHETWNELLSNDWELVEHQIND ECCCCCEEHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH AAA CCC >Mature Secondary Structure MLNSIFVSVESPSQRAKKPPVSRWFLFSLIRRMNQPVREALPTPAGWLVAPARDFCLFFI CCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCEEEECCCCEEEEEE RDPKSVMVAPTVLTQLWYCTEQGIPTQLKNTRRLDYESAHETWNELLSNDWELVEHQIND ECCCCCEEHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH AAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA