| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025139
Identifier: 124025139
GI number: 124025139
Start: 396294
End: 397043
Strand: Direct
Name: 124025139
Synonym: NATL1_04261
Alternate gene names: NA
Gene position: 396294-397043 (Clockwise)
Preceding gene: 124025138
Following gene: 124025142
Centisome position: 21.25
GC content: 26.4
Gene sequence:
>750_bases ATGACTAACAAGTTTATTATTAGTAAATATTTTAGTTATGTAATAATAATTTTCTTCGTTGTTATTTTAATTATTACTTT TATTCACTTGGATGTTAATATTATTGCTGATTTCTTTTATGGTATTGTTAGCGGTTTAAATACGAATAACTTTTTCAGCT TAATATTAATTTTCTTATTATTTATATTAAGATCCACTAGTATCATAATTCCAGTTTTACCTGGAACAATATTTTCCGCT ACTGCTGGTTTTCAGTTTGGCTTTACGCAGGGGTTGGTTATTATATTTTTTGCAGATTTTTTCTCTTGTTCAATATCATT TTTATTGGCTAGAAAATTAGGAAGAAAATATATTACTAGATTACTTGGTTCAAGACAAATGAGAAGAGTTGAAAGCATTA GTCAAGATTATTTAGAAAATAATTATTTCCTTATGACAGCTCTATTGATGTCGGGGTTTTTTGATTTTGTTTGCTATGCC ATAGGACTGACAAAAGTAACATGGAAAAGGTTTATGCCTGCTTTAATTTTTAGCATAATAATCTCCGATTCACCCTTTGT CGCCAGCGGTGTTGCCGCAAGAAAAATCAAGGATATTGGATTAAAAAATTTCTTACAAAAAATATTAAATGGAGAATTAG ATACGATTTCTGGAAATTATCTTTTTCTATTCATAACATCTTTTTTAATAATATTTACTTTGGCAATGATAAATATATAT TTACAAAAAAAATCTAATATTATTAAGTAA
Upstream 100 bases:
>100_bases TCTAAAGTTTGAACATAATTAGTAAGTCTTGTAGAGATTGTTAATGATTTCATTGCTATAAATTCAAGATAGAATTATAT TTTATCTTGAAAAATATTTC
Downstream 100 bases:
>100_bases TTTATTGGTTAAAAAAAGCCCCTGATGGGGCTTTGGTGGATTTGGTTATAGCTGCTAGCTTTGGTAAGACTTACCTCTAT AAGTAAGTTGTATATGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTNKFIISKYFSYVIIIFFVVILIITFIHLDVNIIADFFYGIVSGLNTNNFFSLILIFLLFILRSTSIIIPVLPGTIFSA TAGFQFGFTQGLVIIFFADFFSCSISFLLARKLGRKYITRLLGSRQMRRVESISQDYLENNYFLMTALLMSGFFDFVCYA IGLTKVTWKRFMPALIFSIIISDSPFVASGVAARKIKDIGLKNFLQKILNGELDTISGNYLFLFITSFLIIFTLAMINIY LQKKSNIIK
Sequences:
>Translated_249_residues MTNKFIISKYFSYVIIIFFVVILIITFIHLDVNIIADFFYGIVSGLNTNNFFSLILIFLLFILRSTSIIIPVLPGTIFSA TAGFQFGFTQGLVIIFFADFFSCSISFLLARKLGRKYITRLLGSRQMRRVESISQDYLENNYFLMTALLMSGFFDFVCYA IGLTKVTWKRFMPALIFSIIISDSPFVASGVAARKIKDIGLKNFLQKILNGELDTISGNYLFLFITSFLIIFTLAMINIY LQKKSNIIK >Mature_248_residues TNKFIISKYFSYVIIIFFVVILIITFIHLDVNIIADFFYGIVSGLNTNNFFSLILIFLLFILRSTSIIIPVLPGTIFSAT AGFQFGFTQGLVIIFFADFFSCSISFLLARKLGRKYITRLLGSRQMRRVESISQDYLENNYFLMTALLMSGFFDFVCYAI GLTKVTWKRFMPALIFSIIISDSPFVASGVAARKIKDIGLKNFLQKILNGELDTISGNYLFLFITSFLIIFTLAMINIYL QKKSNIIK
Specific function: Unknown
COG id: COG0398
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28427; Mature: 28295
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKFIISKYFSYVIIIFFVVILIITFIHLDVNIIADFFYGIVSGLNTNNFFSLILIFLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FILRSTSIIIPVLPGTIFSATAGFQFGFTQGLVIIFFADFFSCSISFLLARKLGRKYITR HHHCCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGSRQMRRVESISQDYLENNYFLMTALLMSGFFDFVCYAIGLTKVTWKRFMPALIFSII HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISDSPFVASGVAARKIKDIGLKNFLQKILNGELDTISGNYLFLFITSFLIIFTLAMINIY HCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LQKKSNIIK HHHHCCCCC >Mature Secondary Structure TNKFIISKYFSYVIIIFFVVILIITFIHLDVNIIADFFYGIVSGLNTNNFFSLILIFLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FILRSTSIIIPVLPGTIFSATAGFQFGFTQGLVIIFFADFFSCSISFLLARKLGRKYITR HHHCCCCEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGSRQMRRVESISQDYLENNYFLMTALLMSGFFDFVCYAIGLTKVTWKRFMPALIFSII HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISDSPFVASGVAARKIKDIGLKNFLQKILNGELDTISGNYLFLFITSFLIIFTLAMINIY HCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LQKKSNIIK HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA