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The map label for this gene is cpeB [H]

Identifier: 124025098

GI number: 124025098

Start: 357094

End: 357642

Strand: Direct

Name: cpeB [H]

Synonym: NATL1_03851

Alternate gene names: 124025098

Gene position: 357094-357642 (Clockwise)

Preceding gene: 124025094

Following gene: 124025099

Centisome position: 19.15

GC content: 41.89

Gene sequence:

>549_bases
ATGCTTGATGCGTTTTCTAGAACAGTTGTAAGTGCTGATGCCAAGGGCGCCGCAATTGGTAGTGAGGATCTTGCAGATTT
AAGAAAGTACGTGGCAGATGCAAATAAAAGAATTGATGCAACTCTTGCAATAACTCAAAATGTCTCTTGCATTGCTGCAG
ATGCTGTGGCGGGAATGGTTTGTGAAAATACTGGGCTTACTCAACCAGGAGGGCATTGCTATCCCACTCGTAGAATGGCA
GCTTGTTTAAGGGATGGAGAAATTATTTTGAGATATGTAAGCTACGCGCTTCTTGCAGGGGATCCCTCTGTTCTTGAAGA
TAGATGCCTCAATGGTTTAAAAGAAACATATCTTGCTCTTGGCGTCCCAACCTCTAATGCTATTAGAGCCGTTGAAATAA
TGAAGATTGCCACAGTCGCAATTATGACCGAGAAAAATACAGGAAGAAAAATGTTTAAAGGGATTAATTCTGGATCAGGA
GCACAATGTCAAGACATCGCCTCTGAGGCGGCATCTTATTTTGATCTTGTAATAGAAGCTTTGAGGTAA

Upstream 100 bases:

>100_bases
ACTGTAAGTCTTAAGTTGAATAAGTAATGAAGTAATGAAGTAATGACTATTAAGTCTTTACTTTAACTCTTTTACTTATT
AGAAGGTAGGTATTTAAAAG

Downstream 100 bases:

>100_bases
ATTTTAAACTCTAATTGCTCCACTACATCACGCAAACCATTTCTTATTAAGCCACTATGAAATCTGCAGTTACAACCGTT
GTTAGCGCAGCTGATGCAGC

Product: phycobilisome protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MLDAFSRTVVSADAKGAAIGSEDLADLRKYVADANKRIDATLAITQNVSCIAADAVAGMVCENTGLTQPGGHCYPTRRMA
ACLRDGEIILRYVSYALLAGDPSVLEDRCLNGLKETYLALGVPTSNAIRAVEIMKIATVAIMTEKNTGRKMFKGINSGSG
AQCQDIASEAASYFDLVIEALR

Sequences:

>Translated_182_residues
MLDAFSRTVVSADAKGAAIGSEDLADLRKYVADANKRIDATLAITQNVSCIAADAVAGMVCENTGLTQPGGHCYPTRRMA
ACLRDGEIILRYVSYALLAGDPSVLEDRCLNGLKETYLALGVPTSNAIRAVEIMKIATVAIMTEKNTGRKMFKGINSGSG
AQCQDIASEAASYFDLVIEALR
>Mature_182_residues
MLDAFSRTVVSADAKGAAIGSEDLADLRKYVADANKRIDATLAITQNVSCIAADAVAGMVCENTGLTQPGGHCYPTRRMA
ACLRDGEIILRYVSYALLAGDPSVLEDRCLNGLKETYLALGVPTSNAIRAVEIMKIATVAIMTEKNTGRKMFKGINSGSG
AQCQDIASEAASYFDLVIEALR

Specific function: Green-light absorbing phycoerythrin of unknown function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 19298; Mature: 19298

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDAFSRTVVSADAKGAAIGSEDLADLRKYVADANKRIDATLAITQNVSCIAADAVAGMV
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHH
CENTGLTQPGGHCYPTRRMAACLRDGEIILRYVSYALLAGDPSVLEDRCLNGLKETYLAL
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GVPTSNAIRAVEIMKIATVAIMTEKNTGRKMFKGINSGSGAQCQDIASEAASYFDLVIEA
CCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LR
HC
>Mature Secondary Structure
MLDAFSRTVVSADAKGAAIGSEDLADLRKYVADANKRIDATLAITQNVSCIAADAVAGMV
CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHH
CENTGLTQPGGHCYPTRRMAACLRDGEIILRYVSYALLAGDPSVLEDRCLNGLKETYLAL
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GVPTSNAIRAVEIMKIATVAIMTEKNTGRKMFKGINSGSGAQCQDIASEAASYFDLVIEA
CCCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LR
HC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917486 [H]