Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is sfsA [H]

Identifier: 124025053

GI number: 124025053

Start: 314366

End: 315127

Strand: Direct

Name: sfsA [H]

Synonym: NATL1_03401

Alternate gene names: 124025053

Gene position: 314366-315127 (Clockwise)

Preceding gene: 124025051

Following gene: 124025054

Centisome position: 16.86

GC content: 36.61

Gene sequence:

>762_bases
GTGATTGAAATTGGTAAAACCATTATTAAGTTTCCGCCTCTTATAGAGGGAATATTAATTAAGAGATATAAAAGGTTTTT
GGCCGATATTGAGTTGGATGATGGAGAGGTTGTTACAGCTCATTGTGCAAATACAGGACCAATGAAAGGGGTTTTGTGGC
CTGGGGGGAGAGTCAGACTTAAGTATTCTCCTTCGCCTAAACGTAAATTAGATTGGTCTTGGGAGCAAGCTGAGGTGCCT
AGTCATAATGAGAAGAAGAAATGCTGGGTTGGTATTAATACATCTTTGCCTAATAAATTGATTAAACATCTAATTGAAGC
AAATTGTTTAGAGAGGCAATTTGGTCAAATTTCAAGCATTAAGCCTGAGGTTGTTTACGGTTTAGAAAGAAAAAGTAGAA
TTGATTTATTGCTTTATCCAAGCATTCAGAATGAAGATAGTAGAAAAATATTTGTCGAGGTTAAAAATACAACCTGGTGT
GATGATTCTTTAGCATTGTTCCCAGATACAGTAACGACTAGAGGTCAAAAACATTTAAAAGAATTAATGAGTGTTTATCC
AGACTCTCGGGCAGTGCTAATTCCTTGTATTAGTAGAAGCGATATGGAACTTTTTTCACCTGGTGAAATAGCAGATCCTG
AGTATGGGAGATTGTTTAGAGAGGCATTAACTAAGGGTGTTGAAGTGATTCCATGCGCATTTGGTTTCTTTATAGATCAC
ATCACTTGGGAAGGTACTAGACCATTAAAGAGTTCGAGATAA

Upstream 100 bases:

>100_bases
GCAATTTCTTTGATTGATTTCGACATGTTAAATTTGAAAAAAGAGAGCTTTCATTTTCTAAAATATTTTGTAGTTCTTGT
TTTAATTGGATGTTAATTAA

Downstream 100 bases:

>100_bases
AAATAAACTATTTCAACATCAATCACAGGCATATATAGTTTAGCTATTTTAACTAGTTCTTGTTTTTTGGTTTGACTGCT
TCAGTTCTGTATAGGATTTG

Product: sugar fermentation stimulation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MIEIGKTIIKFPPLIEGILIKRYKRFLADIELDDGEVVTAHCANTGPMKGVLWPGGRVRLKYSPSPKRKLDWSWEQAEVP
SHNEKKKCWVGINTSLPNKLIKHLIEANCLERQFGQISSIKPEVVYGLERKSRIDLLLYPSIQNEDSRKIFVEVKNTTWC
DDSLALFPDTVTTRGQKHLKELMSVYPDSRAVLIPCISRSDMELFSPGEIADPEYGRLFREALTKGVEVIPCAFGFFIDH
ITWEGTRPLKSSR

Sequences:

>Translated_253_residues
MIEIGKTIIKFPPLIEGILIKRYKRFLADIELDDGEVVTAHCANTGPMKGVLWPGGRVRLKYSPSPKRKLDWSWEQAEVP
SHNEKKKCWVGINTSLPNKLIKHLIEANCLERQFGQISSIKPEVVYGLERKSRIDLLLYPSIQNEDSRKIFVEVKNTTWC
DDSLALFPDTVTTRGQKHLKELMSVYPDSRAVLIPCISRSDMELFSPGEIADPEYGRLFREALTKGVEVIPCAFGFFIDH
ITWEGTRPLKSSR
>Mature_253_residues
MIEIGKTIIKFPPLIEGILIKRYKRFLADIELDDGEVVTAHCANTGPMKGVLWPGGRVRLKYSPSPKRKLDWSWEQAEVP
SHNEKKKCWVGINTSLPNKLIKHLIEANCLERQFGQISSIKPEVVYGLERKSRIDLLLYPSIQNEDSRKIFVEVKNTTWC
DDSLALFPDTVTTRGQKHLKELMSVYPDSRAVLIPCISRSDMELFSPGEIADPEYGRLFREALTKGVEVIPCAFGFFIDH
ITWEGTRPLKSSR

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family [H]

Homologues:

Organism=Escherichia coli, GI1786340, Length=221, Percent_Identity=41.6289592760181, Blast_Score=148, Evalue=4e-37,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005224 [H]

Pfam domain/function: PF03749 SfsA [H]

EC number: NA

Molecular weight: Translated: 28872; Mature: 28872

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIGKTIIKFPPLIEGILIKRYKRFLADIELDDGEVVTAHCANTGPMKGVLWPGGRVRL
CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCEEEE
KYSPSPKRKLDWSWEQAEVPSHNEKKKCWVGINTSLPNKLIKHLIEANCLERQFGQISSI
EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC
KPEVVYGLERKSRIDLLLYPSIQNEDSRKIFVEVKNTTWCDDSLALFPDTVTTRGQKHLK
CCHHEECCCCCCCCCEEEECCCCCCCCCEEEEEECCCEECCCCCEECCCHHHCCCHHHHH
ELMSVYPDSRAVLIPCISRSDMELFSPGEIADPEYGRLFREALTKGVEVIPCAFGFFIDH
HHHHHCCCCCEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHH
ITWEGTRPLKSSR
EECCCCCCCCCCC
>Mature Secondary Structure
MIEIGKTIIKFPPLIEGILIKRYKRFLADIELDDGEVVTAHCANTGPMKGVLWPGGRVRL
CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCEEEE
KYSPSPKRKLDWSWEQAEVPSHNEKKKCWVGINTSLPNKLIKHLIEANCLERQFGQISSI
EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC
KPEVVYGLERKSRIDLLLYPSIQNEDSRKIFVEVKNTTWCDDSLALFPDTVTTRGQKHLK
CCHHEECCCCCCCCCEEEECCCCCCCCCEEEEEECCCEECCCCCEECCCHHHCCCHHHHH
ELMSVYPDSRAVLIPCISRSDMELFSPGEIADPEYGRLFREALTKGVEVIPCAFGFFIDH
HHHHHCCCCCEEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHH
ITWEGTRPLKSSR
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA