| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025031
Identifier: 124025031
GI number: 124025031
Start: 296730
End: 297341
Strand: Reverse
Name: 124025031
Synonym: NATL1_03181
Alternate gene names: NA
Gene position: 297341-296730 (Counterclockwise)
Preceding gene: 124025034
Following gene: 124025028
Centisome position: 15.95
GC content: 33.01
Gene sequence:
>612_bases TTGACTGAACCTCAATTCCAAATTCTAGTTTGGCTCTCATATCGAATTGCGGCCACCTTCGCATTCGGTCTCCCATTATT TATATTGATTTGGGCAAAAAGATTGAATGCGAGCTCTATTGATAGACTTTTATCAATTTACTGGAAAGTTTCTAGTATTT ATGCGATAAACCTTTTATTTCTTAGTGTTGAGAGCCAATTAGGTCAATCAATTTCATTCATTGCACCCATACTTATGGTC AGTTCTATTTGGTTTTGGTCTGATCTCAATGAAGAAATTGATGAAATGCCTGATTACAAACCAATTGCTTTAACTACAAG AATTTGGCGATGGACTTTAACCTTTTGGTCTTTACTAAATACTGGACTTCATATATTTAGTTGGAGATGTTTGAATTCAA TTAATGAGAACTATTGTGATAATTGGAGAGAAATTCCATTTAATTCATTCATGACAACAAAAACACTAATAAAATTTATT TTAGGCGGCAATTGGAGTACAGGATTTGCTACATTTTTCGCATATTTATCCCTAATTTTATATCTAATAGGGTTACTTCA ATGGTTGATCATCCAATTACCAAAGAATGGCCGTTTCGCCGGTAAATTTTAA
Upstream 100 bases:
>100_bases TCTAAAAGTTAGGAAAATATAGAGAAAAGACTTTAATAATTAAAAATAATCATAAAAAGATAACCTTAAGGTTGATAATA CATATGAATGAGATTTTTTT
Downstream 100 bases:
>100_bases AAAATAATAACTTTAATATTAAAAGTTAATTACTATTTAAATAGCTAAGACTACTTTTTCGCACCTTTTGCAAATATTTG TATGTTGAGGATTCTTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MTEPQFQILVWLSYRIAATFAFGLPLFILIWAKRLNASSIDRLLSIYWKVSSIYAINLLFLSVESQLGQSISFIAPILMV SSIWFWSDLNEEIDEMPDYKPIALTTRIWRWTLTFWSLLNTGLHIFSWRCLNSINENYCDNWREIPFNSFMTTKTLIKFI LGGNWSTGFATFFAYLSLILYLIGLLQWLIIQLPKNGRFAGKF
Sequences:
>Translated_203_residues MTEPQFQILVWLSYRIAATFAFGLPLFILIWAKRLNASSIDRLLSIYWKVSSIYAINLLFLSVESQLGQSISFIAPILMV SSIWFWSDLNEEIDEMPDYKPIALTTRIWRWTLTFWSLLNTGLHIFSWRCLNSINENYCDNWREIPFNSFMTTKTLIKFI LGGNWSTGFATFFAYLSLILYLIGLLQWLIIQLPKNGRFAGKF >Mature_202_residues TEPQFQILVWLSYRIAATFAFGLPLFILIWAKRLNASSIDRLLSIYWKVSSIYAINLLFLSVESQLGQSISFIAPILMVS SIWFWSDLNEEIDEMPDYKPIALTTRIWRWTLTFWSLLNTGLHIFSWRCLNSINENYCDNWREIPFNSFMTTKTLIKFIL GGNWSTGFATFFAYLSLILYLIGLLQWLIIQLPKNGRFAGKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23765; Mature: 23634
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPQFQILVWLSYRIAATFAFGLPLFILIWAKRLNASSIDRLLSIYWKVSSIYAINLLF CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LSVESQLGQSISFIAPILMVSSIWFWSDLNEEIDEMPDYKPIALTTRIWRWTLTFWSLLN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH TGLHIFSWRCLNSINENYCDNWREIPFNSFMTTKTLIKFILGGNWSTGFATFFAYLSLIL CCHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH YLIGLLQWLIIQLPKNGRFAGKF HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TEPQFQILVWLSYRIAATFAFGLPLFILIWAKRLNASSIDRLLSIYWKVSSIYAINLLF CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LSVESQLGQSISFIAPILMVSSIWFWSDLNEEIDEMPDYKPIALTTRIWRWTLTFWSLLN HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH TGLHIFSWRCLNSINENYCDNWREIPFNSFMTTKTLIKFILGGNWSTGFATFFAYLSLIL CCHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH YLIGLLQWLIIQLPKNGRFAGKF HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA