| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is menE [H]
Identifier: 124024962
GI number: 124024962
Start: 229597
End: 230832
Strand: Reverse
Name: menE [H]
Synonym: NATL1_02491
Alternate gene names: 124024962
Gene position: 230832-229597 (Counterclockwise)
Preceding gene: 124024963
Following gene: 124024959
Centisome position: 12.38
GC content: 36.57
Gene sequence:
>1236_bases ATGACCAAAATTGCAGTTGTAGAGTGTATTCCTGAAAAAAACCTGGACTGTTCAAAAGAAATTTTGAAGAATTTTGAAAA GCATAACTGGGTATATCTAGCGCCTCCAAAAGATCAAACGAAAATCCCCACATCGTCAACCTTACCTGAAGGAGAAGGAA TAATCATTTCAAGCGGGGGCAGCCTTGGAGGGCCAAATCTTTGTTTCCAATCACTTAAAAATCTCACTAATTCGGCTTTA GCAACCGGAAAGTGGTTAAAGAATCATGGCCTTAAGCCAAATGAATGCATCATTCTCAATTCACTACCTTTGCATCATAT AAGTGGTTTCATGCCTTGGTGGAGACATCAGACTTGGGGATCTGGGTATTACTGGATTTCAAATTCTATAATGCATAAAC CACTTCAACTTAAGCAATTTAGTGAAGCATTAACTAATAAACATAGACGTCCATTAATTACATCCCTAGTTCCAACTCAA TTATTATCTTTAATTGATGATCCTGATGGTTTAGAATGGCTTCAATCTCTAGCTATAATCTGGGTTGGAGGATCCATGCT TCCGACAGATCTTGCTGACAAAGCGCGAAGAAAGTCTATTAAATTAGCTCCTTGTTATGGGAGCACCGAAACAGTAGCAA TGGTGACTTGCCTGAGTCCCCAAGATTTTTTAAAAGGAAGTAATAGTGTTGGGTTTCCTCTCGAAGATGTGGAGATAGAA ATCAACAAAAGAAATTCACTTAAGATTAAAACTAGTAGGATTGCAACTTCAAAATGGAAGAATGATAAATTCGAATCAAT TGCAGAATCAAATGGATGGTGGGAAGCAGGCGATTTAGCGCAATACATCACTCTCGACAATAGAACAGCAATTCAAATCC TAGGTAGAAGAGATTCAGCTATAAATTCAGGTGGTGAAACAATTTTCCCAGAAGATATCGAAATGGAATTAATGAAAATA ATCTCAAAACATCAAATCCCAATTAAAGACATTTTTGTACTAGGAGTTAGTGACAAGAAGTGGGGACAACGTTTAATTGT CTTAACTAAATTCAAAGAAAAAGGAATTCATAGATATCCAATTATCAAACTTCTAACCGATCTCATTAAGGACTGGCAAC CATCCAAAAAACCACTAAAATGGTACGACTGTCCAAAACTTTCACGAAATATCAATAAAAAATGGGAAGTAAAAAAATGG CAAGATTGGGTAGCCTTGAATAGTCCTATCAGCTAA
Upstream 100 bases:
>100_bases AAGTCAAAGGGGGAAATCCTTGTTCACCTGGACTTGCACCTGGATGGTGCCCAAAAGGCCCACTCTTCAACAACAATCCG AAATTAGTCTGGGAAGCCGT
Downstream 100 bases:
>100_bases AAATTCAAGCCAGATTCATGAAGCCACAAATTTATTTGTTTAGATAATGCACATTTTTCTCTTGTAATCGGATTTATTGA TACATGTTTTATATTTGTCG
Product: putative O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase)
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MTKIAVVECIPEKNLDCSKEILKNFEKHNWVYLAPPKDQTKIPTSSTLPEGEGIIISSGGSLGGPNLCFQSLKNLTNSAL ATGKWLKNHGLKPNECIILNSLPLHHISGFMPWWRHQTWGSGYYWISNSIMHKPLQLKQFSEALTNKHRRPLITSLVPTQ LLSLIDDPDGLEWLQSLAIIWVGGSMLPTDLADKARRKSIKLAPCYGSTETVAMVTCLSPQDFLKGSNSVGFPLEDVEIE INKRNSLKIKTSRIATSKWKNDKFESIAESNGWWEAGDLAQYITLDNRTAIQILGRRDSAINSGGETIFPEDIEMELMKI ISKHQIPIKDIFVLGVSDKKWGQRLIVLTKFKEKGIHRYPIIKLLTDLIKDWQPSKKPLKWYDCPKLSRNINKKWEVKKW QDWVALNSPIS
Sequences:
>Translated_411_residues MTKIAVVECIPEKNLDCSKEILKNFEKHNWVYLAPPKDQTKIPTSSTLPEGEGIIISSGGSLGGPNLCFQSLKNLTNSAL ATGKWLKNHGLKPNECIILNSLPLHHISGFMPWWRHQTWGSGYYWISNSIMHKPLQLKQFSEALTNKHRRPLITSLVPTQ LLSLIDDPDGLEWLQSLAIIWVGGSMLPTDLADKARRKSIKLAPCYGSTETVAMVTCLSPQDFLKGSNSVGFPLEDVEIE INKRNSLKIKTSRIATSKWKNDKFESIAESNGWWEAGDLAQYITLDNRTAIQILGRRDSAINSGGETIFPEDIEMELMKI ISKHQIPIKDIFVLGVSDKKWGQRLIVLTKFKEKGIHRYPIIKLLTDLIKDWQPSKKPLKWYDCPKLSRNINKKWEVKKW QDWVALNSPIS >Mature_410_residues TKIAVVECIPEKNLDCSKEILKNFEKHNWVYLAPPKDQTKIPTSSTLPEGEGIIISSGGSLGGPNLCFQSLKNLTNSALA TGKWLKNHGLKPNECIILNSLPLHHISGFMPWWRHQTWGSGYYWISNSIMHKPLQLKQFSEALTNKHRRPLITSLVPTQL LSLIDDPDGLEWLQSLAIIWVGGSMLPTDLADKARRKSIKLAPCYGSTETVAMVTCLSPQDFLKGSNSVGFPLEDVEIEI NKRNSLKIKTSRIATSKWKNDKFESIAESNGWWEAGDLAQYITLDNRTAIQILGRRDSAINSGGETIFPEDIEMELMKII SKHQIPIKDIFVLGVSDKKWGQRLIVLTKFKEKGIHRYPIIKLLTDLIKDWQPSKKPLKWYDCPKLSRNINKKWEVKKWQ DWVALNSPIS
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788595, Length=307, Percent_Identity=27.3615635179153, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 46649; Mature: 46517
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIAVVECIPEKNLDCSKEILKNFEKHNWVYLAPPKDQTKIPTSSTLPEGEGIIISSGG CCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC SLGGPNLCFQSLKNLTNSALATGKWLKNHGLKPNECIILNSLPLHHISGFMPWWRHQTWG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCHHHHCCCCC SGYYWISNSIMHKPLQLKQFSEALTNKHRRPLITSLVPTQLLSLIDDPDGLEWLQSLAII CEEEEECCCHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEE WVGGSMLPTDLADKARRKSIKLAPCYGSTETVAMVTCLSPQDFLKGSNSVGFPLEDVEIE EECCCCCCHHHHHHHHHCCEEEEECCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCEEEE INKRNSLKIKTSRIATSKWKNDKFESIAESNGWWEAGDLAQYITLDNRTAIQILGRRDSA EECCCCEEEEEHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCC INSGGETIFPEDIEMELMKIISKHQIPIKDIFVLGVSDKKWGQRLIVLTKFKEKGIHRYP CCCCCCEECCCHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEEEEHHHCCCCCCH IIKLLTDLIKDWQPSKKPLKWYDCPKLSRNINKKWEVKKWQDWVALNSPIS HHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHEECCCCCC >Mature Secondary Structure TKIAVVECIPEKNLDCSKEILKNFEKHNWVYLAPPKDQTKIPTSSTLPEGEGIIISSGG CEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC SLGGPNLCFQSLKNLTNSALATGKWLKNHGLKPNECIILNSLPLHHISGFMPWWRHQTWG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCHHHHCCCCC SGYYWISNSIMHKPLQLKQFSEALTNKHRRPLITSLVPTQLLSLIDDPDGLEWLQSLAII CEEEEECCCHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEE WVGGSMLPTDLADKARRKSIKLAPCYGSTETVAMVTCLSPQDFLKGSNSVGFPLEDVEIE EECCCCCCHHHHHHHHHCCEEEEECCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCEEEE INKRNSLKIKTSRIATSKWKNDKFESIAESNGWWEAGDLAQYITLDNRTAIQILGRRDSA EECCCCEEEEEHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCCC INSGGETIFPEDIEMELMKIISKHQIPIKDIFVLGVSDKKWGQRLIVLTKFKEKGIHRYP CCCCCCEECCCHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEEEEEEHHHCCCCCCH IIKLLTDLIKDWQPSKKPLKWYDCPKLSRNINKKWEVKKWQDWVALNSPIS HHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1629163; 8566759; 9387221; 9384377 [H]