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The map label for this gene is 124024927

Identifier: 124024927

GI number: 124024927

Start: 199324

End: 199755

Strand: Direct

Name: 124024927

Synonym: NATL1_02141

Alternate gene names: NA

Gene position: 199324-199755 (Clockwise)

Preceding gene: 124024926

Following gene: 124024930

Centisome position: 10.69

GC content: 37.27

Gene sequence:

>432_bases
ATGAGTGTTCGCCTTTACATCGGTAATTTGCCGCAGAATGTCAATGTTAAAGAACTTGAAGCCCTCCTAACATCAATTGG
AGATGGAATCAAATTTAAAGCTGTTTTTGATAGAGATACCAAGGCTTGTAGGGGATTTGGTTTCGCTAATGTCAAAGATG
AGAATGTCTCAAATGAGCTTATTGAAAAATTAAATGGCTATGAATTTAACGGCAACAAATTGAGGGTTGAGCGTTCTGAG
CGAAAAGATTCAAATTCCAGTAATTCAAGAAGAGGAGCCAGTTCAAACAATGGGAATAAAGGTTCTAATCGCAAAGATGT
TAAGAAAGTTGTACATAGCGATGCGCCAATTAAAGAAGCTCCAGATCCAAGATGGGCTGGAGAACTATCAAAATTAAAAG
ATCTTTTAGCCAATCAAAAAACTCCCGCTTAA

Upstream 100 bases:

>100_bases
TAAATGGACCCTAGAGAATTCACCCTTTTTGTGATTAACTACACACAAATCAATTTAATCTCGGCCGTATGCCGTCGTCT
TCTTATCCCCTTTTTTCTAA

Downstream 100 bases:

>100_bases
ATGTTCAATTAATTAGTGTTCTAAGTTTATATTTTTCATCGTTGATGGTTATTAGATAGGAGATGGGTAGGTTTACAGCT
TTGACCCATCCTTTTACATA

Product: RNA recognition motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSVRLYIGNLPQNVNVKELEALLTSIGDGIKFKAVFDRDTKACRGFGFANVKDENVSNELIEKLNGYEFNGNKLRVERSE
RKDSNSSNSRRGASSNNGNKGSNRKDVKKVVHSDAPIKEAPDPRWAGELSKLKDLLANQKTPA

Sequences:

>Translated_143_residues
MSVRLYIGNLPQNVNVKELEALLTSIGDGIKFKAVFDRDTKACRGFGFANVKDENVSNELIEKLNGYEFNGNKLRVERSE
RKDSNSSNSRRGASSNNGNKGSNRKDVKKVVHSDAPIKEAPDPRWAGELSKLKDLLANQKTPA
>Mature_142_residues
SVRLYIGNLPQNVNVKELEALLTSIGDGIKFKAVFDRDTKACRGFGFANVKDENVSNELIEKLNGYEFNGNKLRVERSER
KDSNSSNSRRGASSNNGNKGSNRKDVKKVVHSDAPIKEAPDPRWAGELSKLKDLLANQKTPA

Specific function: Unknown

COG id: COG0724

COG function: function code R; RNA-binding proteins (RRM domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15834; Mature: 15703

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS50102 RRM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLYIGNLPQNVNVKELEALLTSIGDGIKFKAVFDRDTKACRGFGFANVKDENVSNEL
CEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCHHHHH
IEKLNGYEFNGNKLRVERSERKDSNSSNSRRGASSNNGNKGSNRKDVKKVVHSDAPIKEA
HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
PDPRWAGELSKLKDLLANQKTPA
CCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SVRLYIGNLPQNVNVKELEALLTSIGDGIKFKAVFDRDTKACRGFGFANVKDENVSNEL
EEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCCCHHHHH
IEKLNGYEFNGNKLRVERSERKDSNSSNSRRGASSNNGNKGSNRKDVKKVVHSDAPIKEA
HHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
PDPRWAGELSKLKDLLANQKTPA
CCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA