| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024910
Identifier: 124024910
GI number: 124024910
Start: 182340
End: 183911
Strand: Direct
Name: 124024910
Synonym: NATL1_01971
Alternate gene names: NA
Gene position: 182340-183911 (Clockwise)
Preceding gene: 124024906
Following gene: 124024911
Centisome position: 9.78
GC content: 33.4
Gene sequence:
>1572_bases TTGATATTGACCGAGAGCATTTCCCACAACTGTAGGCCTCCAATTTTATGGATTTTTCTTTTTTGGACCATAGCTTGTGG AATTGCATTTGTCTCGCTGGGTAATTTGCCTTTAAGAGATTTTGATGAAGCAACTGTCGCAAGAGTTGCATTGGAATTAA ACCAAAAAAGTGGACTAGAACGATTGCTTCCTTCTATCTGGGATAAGCCCTATTTGAATAAACCCCCAGGGTTGCATTGG ATAATATCTTTTGCAATTGGAATTAGTAGAAGTTTCCAAAATAATTTTGATTTTTTACCCTCTGAGTTTTGTATAAGATT TTTCCCAGCACTATTTTCGACTTTTGTTGTTCCATTGGGTGGTCTTATTCAGTGGAACTTGCGCCCAAAAGATCGAATAG CATGCATAACTACATCAGCAATTTTATTGACTTTGTTGCCAATTATTAGATATGGGCGAATGGCAATGTTGGATGGAACG CAGCTTAGTGCTATTGCACTTTTATGGTTTTGCTTATCATCTATAAAAAATAATAGGCCAACTAATTTTAATTTTTTAGG AGCTGGATTTACATGTAGTTTCATGCTTTTACTTAAAGCCCCTGTAATTATTCCTGCACTATTTGCATCTTTATTACCTT TAATTTGGGAATATAATTCAAAAAAATATTTTAATAATTTTTCATGGTCTTGGTTCTTCTATGGACTAATTCCAGGTTTT GCTTGGCATGTATGGAATTTCATTTCATATGGTTCAGGAGCTTTTTGGTTGTGGTGGGGAGATGGGGCAGGAAGAGTTTT ATTTGAAAAAGGCTCAGGTAGCGAGCTAGGAGTTTTGGTACCAATAATTGAAATACTTGAAGGGGGATGGCCTTGGATTC TTCTATGGCCAATTGGTTTTTTGTGGGCATGCTTGAGCCTTAATACTCGTTGGGGAGTTTGGGCTTTAAGTACTCAGATT ATTATTTTAGGAAGTATTTTACCTCTAAAAATGCAACTTCCTTGGTATATTCATCCATTTTGGTTGCCCTTTGCTTTGGT ATGCGGACCTCCAGTTTCTTGGTTAATTCAAAGAGAAGAGAACGGTTATATTTTCGCTAGAAAAATTTTAAGAAAAATCC CATATATATTTTCTTTAATTGGACTATGCATATTGACTTTTTCTTTATTACTTAAGTTAAATATTTTCAACATTGGAGAA GGTTACTTTTATTCAATTTTCTTTATAAGTTTAGCTTGGTTTATTGGGGGATTATTATTATCTAATTCAAGAAAGAATAT TAGAAAAATTGGTTTTATTGGATTGATTGTTGGAAGCATAATAGGCTTATTCTTTTTTGTGAGTTCAAAATTTTGGTTAT GGGAAATAAATGAAAATTGGGATGTAAGACCTGTAGCTGAATTTATAGATGGCTTTCCTAATCAACAAATTTTTATCAAA AATAGCTTTGAGAGACCAAGTTTAAATTGGTATGCAGGAAAACAAATCAAAAGTTTTGACGAGGAAGATAAAACTAAATG CAAAGTAATTAAGAAAACTAATGCTTGGGATCTCTATACATGTAATGATTAA
Upstream 100 bases:
>100_bases AAGTTATTTAATAATTCAATTCTTTTTTAATAATGCTTGAAAATTTGTTATTCAAAAGCTTTATTGGTCTTTTAGAGATA TAAATAGGTGGAATAATTCT
Downstream 100 bases:
>100_bases ATCAAATATCACTATTAACATATTTTTCACTTCTTCTTCTTTTATTTGTAAGAATAAATTAGTAATTAGGGTTTTCTGAA AAAGTGTATTGTATTGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family; Family; 4-Amino-4-Deoxy-L-Arabinose Transferase; Glycosyltransferase; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MILTESISHNCRPPILWIFLFWTIACGIAFVSLGNLPLRDFDEATVARVALELNQKSGLERLLPSIWDKPYLNKPPGLHW IISFAIGISRSFQNNFDFLPSEFCIRFFPALFSTFVVPLGGLIQWNLRPKDRIACITTSAILLTLLPIIRYGRMAMLDGT QLSAIALLWFCLSSIKNNRPTNFNFLGAGFTCSFMLLLKAPVIIPALFASLLPLIWEYNSKKYFNNFSWSWFFYGLIPGF AWHVWNFISYGSGAFWLWWGDGAGRVLFEKGSGSELGVLVPIIEILEGGWPWILLWPIGFLWACLSLNTRWGVWALSTQI IILGSILPLKMQLPWYIHPFWLPFALVCGPPVSWLIQREENGYIFARKILRKIPYIFSLIGLCILTFSLLLKLNIFNIGE GYFYSIFFISLAWFIGGLLLSNSRKNIRKIGFIGLIVGSIIGLFFFVSSKFWLWEINENWDVRPVAEFIDGFPNQQIFIK NSFERPSLNWYAGKQIKSFDEEDKTKCKVIKKTNAWDLYTCND
Sequences:
>Translated_523_residues MILTESISHNCRPPILWIFLFWTIACGIAFVSLGNLPLRDFDEATVARVALELNQKSGLERLLPSIWDKPYLNKPPGLHW IISFAIGISRSFQNNFDFLPSEFCIRFFPALFSTFVVPLGGLIQWNLRPKDRIACITTSAILLTLLPIIRYGRMAMLDGT QLSAIALLWFCLSSIKNNRPTNFNFLGAGFTCSFMLLLKAPVIIPALFASLLPLIWEYNSKKYFNNFSWSWFFYGLIPGF AWHVWNFISYGSGAFWLWWGDGAGRVLFEKGSGSELGVLVPIIEILEGGWPWILLWPIGFLWACLSLNTRWGVWALSTQI IILGSILPLKMQLPWYIHPFWLPFALVCGPPVSWLIQREENGYIFARKILRKIPYIFSLIGLCILTFSLLLKLNIFNIGE GYFYSIFFISLAWFIGGLLLSNSRKNIRKIGFIGLIVGSIIGLFFFVSSKFWLWEINENWDVRPVAEFIDGFPNQQIFIK NSFERPSLNWYAGKQIKSFDEEDKTKCKVIKKTNAWDLYTCND >Mature_523_residues MILTESISHNCRPPILWIFLFWTIACGIAFVSLGNLPLRDFDEATVARVALELNQKSGLERLLPSIWDKPYLNKPPGLHW IISFAIGISRSFQNNFDFLPSEFCIRFFPALFSTFVVPLGGLIQWNLRPKDRIACITTSAILLTLLPIIRYGRMAMLDGT QLSAIALLWFCLSSIKNNRPTNFNFLGAGFTCSFMLLLKAPVIIPALFASLLPLIWEYNSKKYFNNFSWSWFFYGLIPGF AWHVWNFISYGSGAFWLWWGDGAGRVLFEKGSGSELGVLVPIIEILEGGWPWILLWPIGFLWACLSLNTRWGVWALSTQI IILGSILPLKMQLPWYIHPFWLPFALVCGPPVSWLIQREENGYIFARKILRKIPYIFSLIGLCILTFSLLLKLNIFNIGE GYFYSIFFISLAWFIGGLLLSNSRKNIRKIGFIGLIVGSIIGLFFFVSSKFWLWEINENWDVRPVAEFIDGFPNQQIFIK NSFERPSLNWYAGKQIKSFDEEDKTKCKVIKKTNAWDLYTCND
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60136; Mature: 60136
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTESISHNCRPPILWIFLFWTIACGIAFVSLGNLPLRDFDEATVARVALELNQKSGLE CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHH RLLPSIWDKPYLNKPPGLHWIISFAIGISRSFQNNFDFLPSEFCIRFFPALFSTFVVPLG HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC GLIQWNLRPKDRIACITTSAILLTLLPIIRYGRMAMLDGTQLSAIALLWFCLSSIKNNRP CEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCC TNFNFLGAGFTCSFMLLLKAPVIIPALFASLLPLIWEYNSKKYFNNFSWSWFFYGLIPGF CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHH AWHVWNFISYGSGAFWLWWGDGAGRVLFEKGSGSELGVLVPIIEILEGGWPWILLWPIGF HHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEHHHHHH LWACLSLNTRWGVWALSTQIIILGSILPLKMQLPWYIHPFWLPFALVCGPPVSWLIQREE HHHHHHCCCCCCEEEHHHEEEEEECCCCEEECCCCEECHHHHHHHHHCCCCCEEEEEECC NGYIFARKILRKIPYIFSLIGLCILTFSLLLKLNIFNIGEGYFYSIFFISLAWFIGGLLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHH SNSRKNIRKIGFIGLIVGSIIGLFFFVSSKFWLWEINENWDVRPVAEFIDGFPNQQIFIK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEEE NSFERPSLNWYAGKQIKSFDEEDKTKCKVIKKTNAWDLYTCND CCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCEEEEECCC >Mature Secondary Structure MILTESISHNCRPPILWIFLFWTIACGIAFVSLGNLPLRDFDEATVARVALELNQKSGLE CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHH RLLPSIWDKPYLNKPPGLHWIISFAIGISRSFQNNFDFLPSEFCIRFFPALFSTFVVPLG HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC GLIQWNLRPKDRIACITTSAILLTLLPIIRYGRMAMLDGTQLSAIALLWFCLSSIKNNRP CEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCC TNFNFLGAGFTCSFMLLLKAPVIIPALFASLLPLIWEYNSKKYFNNFSWSWFFYGLIPGF CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHH AWHVWNFISYGSGAFWLWWGDGAGRVLFEKGSGSELGVLVPIIEILEGGWPWILLWPIGF HHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEHHHHHH LWACLSLNTRWGVWALSTQIIILGSILPLKMQLPWYIHPFWLPFALVCGPPVSWLIQREE HHHHHHCCCCCCEEEHHHEEEEEECCCCEEECCCCEECHHHHHHHHHCCCCCEEEEEECC NGYIFARKILRKIPYIFSLIGLCILTFSLLLKLNIFNIGEGYFYSIFFISLAWFIGGLLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHH SNSRKNIRKIGFIGLIVGSIIGLFFFVSSKFWLWEINENWDVRPVAEFIDGFPNQQIFIK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEEE NSFERPSLNWYAGKQIKSFDEEDKTKCKVIKKTNAWDLYTCND CCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA