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The map label for this gene is ndhO

Identifier: 124024906

GI number: 124024906

Start: 180277

End: 180540

Strand: Direct

Name: ndhO

Synonym: NATL1_01931

Alternate gene names: 124024906

Gene position: 180277-180540 (Clockwise)

Preceding gene: 124024904

Following gene: 124024910

Centisome position: 9.67

GC content: 34.85

Gene sequence:

>264_bases
ATGTCTGAACAAACCGGAAAAGTAGATGATTCACAATCACCTCCAAAGGTACAAAAGAAACTCAGAAAAGGAGATCTTGT
AAAAGTTGATCGTGAAAAATATTCTAATAGCTTAGAATCTAAGGCAAGTGATACTAATCTACCTGAATATATTTTTCAAG
GGCCTGGCGAAGTATTATTGATTAAAGGTGATTACTGTCAAGTTAGATGGAGGAGACCAGTCCCTGATGTTTGGATGAAT
TCTGATCATATAGTCTCATATTAA

Upstream 100 bases:

>100_bases
CATTTAATTAATGAAACGATTTTTATCATTTTGTTTTAACTGCTATTCTTCATTTAAATCTTTTAATTTAGTCATTAGTC
TTTTTTATTAATTATTTAAA

Downstream 100 bases:

>100_bases
TACATAATTAAAATTGAAACTATAAGTGAAGCCATTCTTTTTTATTACTTTGTAAAAATTTCCTTTTTTTCTTAGCAAAA
GCAATCATTGCCTTTCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NAD(P)H dehydrogenase I subunit O; NDH-1 subunit O; NDH-O

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MSEQTGKVDDSQSPPKVQKKLRKGDLVKVDREKYSNSLESKASDTNLPEYIFQGPGEVLLIKGDYCQVRWRRPVPDVWMN
SDHIVSY

Sequences:

>Translated_87_residues
MSEQTGKVDDSQSPPKVQKKLRKGDLVKVDREKYSNSLESKASDTNLPEYIFQGPGEVLLIKGDYCQVRWRRPVPDVWMN
SDHIVSY
>Mature_86_residues
SEQTGKVDDSQSPPKVQKKLRKGDLVKVDREKYSNSLESKASDTNLPEYIFQGPGEVLLIKGDYCQVRWRRPVPDVWMNS
DHIVSY

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhO subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDHO_PROM1 (A2BZU7)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001014022.1
- STRING:   A2BZU7
- GeneID:   4780035
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_01931
- eggNOG:   NOG14679
- HOGENOM:   HBG284750
- OMA:   RPVPDVW
- ProtClustDB:   CLSK893551
- BioCyc:   PMAR167555:NATL1_01931-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01354
- InterPro:   IPR020905

Pfam domain/function: PF11910 NdhO

EC number: NA

Molecular weight: Translated: 10012; Mature: 9881

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQTGKVDDSQSPPKVQKKLRKGDLVKVDREKYSNSLESKASDTNLPEYIFQGPGEVLL
CCCCCCCCCCCCCCHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCCHHHHCCCCCEEE
IKGDYCQVRWRRPVPDVWMNSDHIVSY
EECCEEEEEECCCCCCCCCCCCEEECC
>Mature Secondary Structure 
SEQTGKVDDSQSPPKVQKKLRKGDLVKVDREKYSNSLESKASDTNLPEYIFQGPGEVLL
CCCCCCCCCCCCCHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCCHHHHCCCCCEEE
IKGDYCQVRWRRPVPDVWMNSDHIVSY
EECCEEEEEECCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA