Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124024894

Identifier: 124024894

GI number: 124024894

Start: 171646

End: 172377

Strand: Direct

Name: 124024894

Synonym: NATL1_01811

Alternate gene names: NA

Gene position: 171646-172377 (Clockwise)

Preceding gene: 124024892

Following gene: 124024897

Centisome position: 9.2

GC content: 31.83

Gene sequence:

>732_bases
ATGAGACAGAAATTTTTCTTTTTTTTAATTTCTATTTTAATTGTTTTTACTTACACAGTTCCTACACTTGCTGAAAGTAG
CCTTGAAATAAATAATTTTCAGCCATCTAAGCTTTACGAACGCAAATCAATCTGGCCTGATTGGCGCCTTCCATCTTCCA
TTAAGCGCCCAGGATTGAAAGATGATTTAATTTACCCTGATTGGTTTGAAGGTGTATGGGATGTTACTAGCGAGATAGAA
AGTGATCAGAATCAAGAACCTATGATTCATTCCGCTAAATTTATTCGCAATACTTCTGGTGATTTAATAGCTGACCGTGA
ATACAACACTAAGTCTTATGCTTTGAGCACAAAGACTGGTGGTTTTTTATCAGTAAAGAATGATCCTAAATCTCCTAATC
GTCAGTTTGCTAAATTAACCGAAGATAGGTATTTAGAGACAAAGATTATAGGAAGACTGCAAGAAAAAATAGACAATAAT
ATTTTTATTACTGATGAATTAATTTTACAAATTCTTCATACACCAGAATTTAGCAGGGTTAGCCAGGTCGAAACATTAAC
TGAATTTAAAAAATGTGGATCTATTCAAAATAATAAAATAAATATGAGTGATTTTAATATTTGTGGAGAACAATTTCAGG
CGATTTACAATCAACCTGGGCAAAATCTGATTTCTTTGCCAATTAAAACAGAGAAATCCAAATTAATACTTAGAAAGACT
AATGATGATTAG

Upstream 100 bases:

>100_bases
TTGAAGCCATAAAAGAGTTTGTTCTTTATCCAGGAATTGTTCACTTTCGCCAGGAACCAAAACAACATAATTATCCATTT
CTCTAATTAAAGGATCAGAC

Downstream 100 bases:

>100_bases
CTATTGCTAATTGATCTTCAATGAAGTCTCTCCATTTAAAAAGATTTTGCAGACTTGGATCGTTTAGATATATAGAACAA
CCTTGGCCAGTTAGATTTTC

Product: POLO box duplicated region

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MRQKFFFFLISILIVFTYTVPTLAESSLEINNFQPSKLYERKSIWPDWRLPSSIKRPGLKDDLIYPDWFEGVWDVTSEIE
SDQNQEPMIHSAKFIRNTSGDLIADREYNTKSYALSTKTGGFLSVKNDPKSPNRQFAKLTEDRYLETKIIGRLQEKIDNN
IFITDELILQILHTPEFSRVSQVETLTEFKKCGSIQNNKINMSDFNICGEQFQAIYNQPGQNLISLPIKTEKSKLILRKT
NDD

Sequences:

>Translated_243_residues
MRQKFFFFLISILIVFTYTVPTLAESSLEINNFQPSKLYERKSIWPDWRLPSSIKRPGLKDDLIYPDWFEGVWDVTSEIE
SDQNQEPMIHSAKFIRNTSGDLIADREYNTKSYALSTKTGGFLSVKNDPKSPNRQFAKLTEDRYLETKIIGRLQEKIDNN
IFITDELILQILHTPEFSRVSQVETLTEFKKCGSIQNNKINMSDFNICGEQFQAIYNQPGQNLISLPIKTEKSKLILRKT
NDD
>Mature_243_residues
MRQKFFFFLISILIVFTYTVPTLAESSLEINNFQPSKLYERKSIWPDWRLPSSIKRPGLKDDLIYPDWFEGVWDVTSEIE
SDQNQEPMIHSAKFIRNTSGDLIADREYNTKSYALSTKTGGFLSVKNDPKSPNRQFAKLTEDRYLETKIIGRLQEKIDNN
IFITDELILQILHTPEFSRVSQVETLTEFKKCGSIQNNKINMSDFNICGEQFQAIYNQPGQNLISLPIKTEKSKLILRKT
NDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28245; Mature: 28245

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQKFFFFLISILIVFTYTVPTLAESSLEINNFQPSKLYERKSIWPDWRLPSSIKRPGLK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCC
DDLIYPDWFEGVWDVTSEIESDQNQEPMIHSAKFIRNTSGDLIADREYNTKSYALSTKTG
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCC
GFLSVKNDPKSPNRQFAKLTEDRYLETKIIGRLQEKIDNNIFITDELILQILHTPEFSRV
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCHHHH
SQVETLTEFKKCGSIQNNKINMSDFNICGEQFQAIYNQPGQNLISLPIKTEKSKLILRKT
HHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCCCEEECCEECCCCEEEEEEC
NDD
CCC
>Mature Secondary Structure
MRQKFFFFLISILIVFTYTVPTLAESSLEINNFQPSKLYERKSIWPDWRLPSSIKRPGLK
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCC
DDLIYPDWFEGVWDVTSEIESDQNQEPMIHSAKFIRNTSGDLIADREYNTKSYALSTKTG
CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCC
GFLSVKNDPKSPNRQFAKLTEDRYLETKIIGRLQEKIDNNIFITDELILQILHTPEFSRV
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCHHHH
SQVETLTEFKKCGSIQNNKINMSDFNICGEQFQAIYNQPGQNLISLPIKTEKSKLILRKT
HHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCCCEEECCEECCCCEEEEEEC
NDD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA