| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is aroK [H]
Identifier: 124024892
GI number: 124024892
Start: 170834
End: 171430
Strand: Direct
Name: aroK [H]
Synonym: NATL1_01791
Alternate gene names: 124024892
Gene position: 170834-171430 (Clockwise)
Preceding gene: 124024884
Following gene: 124024894
Centisome position: 9.16
GC content: 35.51
Gene sequence:
>597_bases ATGGCTGTCCAATCAACCCCTAAAACTCTTAAAGAAAAGTTAGGTGGTCGAAATATATTTTTGATAGGAATGATGGGTTC TGGCAAAAGTCAAACGGGTCCAGTTCTAGCAAAAATGATCAATTATGCTTTTGTTGATACTGATGATGTTATAGAAAAAG CGTCTAAACAATCTATTTCATCTATTTTTGAAAAAGATGGAGAAAAAGTCTTTAGGGATGTTGAAAAAAAAGTTTTAAAA GAAATTAGTCAACATCATTCTCTTGTAATTGCTACCGGAGGGGGTTTAGTTACCTTGCCTGAAAACTGGGGCATTCTTCA TCAAGGAATAGTTATTTGGTTAGATCTTGATTTGAGACGTTCAATTAAACGATTAGAAAGTGATCAAAAGAGACGCCCTT TACTACTTGGGGATAATTTAGCTGAGAATTTTAGTCAGATTTATGAAAGTAGAAAACCAATATATTTAGAGTCAGATTTG AGAATAGAAGTTGAGGATCAATCACCATATGAGGTCGCTACTATGGTTGCTGAACATTTGCCAAGCATCCTTATTGACCC GGAGACTCAAGCCGAACGGCATACCACTGAATTGTAA
Upstream 100 bases:
>100_bases ACAGGTTCTCCCCTCTCCGTGAGGGAAATTCGATGTGATTGCTTCCATAAATTTTTCACATCAACATACATCTTAATAAC TTTTAGTTACTTCTGTCTTT
Downstream 100 bases:
>100_bases AACCTGTTTTGATTTCTAAGTCGCAGGCTGTATCAAGTAAATGTTGAGCCGCTTCTGCTATTGAAGACTTACAGTCAAGA TCCAATGGTAATGAATCGAA
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MAVQSTPKTLKEKLGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKASKQSISSIFEKDGEKVFRDVEKKVLK EISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLESDQKRRPLLLGDNLAENFSQIYESRKPIYLESDL RIEVEDQSPYEVATMVAEHLPSILIDPETQAERHTTEL
Sequences:
>Translated_198_residues MAVQSTPKTLKEKLGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKASKQSISSIFEKDGEKVFRDVEKKVLK EISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLESDQKRRPLLLGDNLAENFSQIYESRKPIYLESDL RIEVEDQSPYEVATMVAEHLPSILIDPETQAERHTTEL >Mature_197_residues AVQSTPKTLKEKLGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKASKQSISSIFEKDGEKVFRDVEKKVLKE ISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRRSIKRLESDQKRRPLLLGDNLAENFSQIYESRKPIYLESDLR IEVEDQSPYEVATMVAEHLPSILIDPETQAERHTTEL
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=168, Percent_Identity=36.9047619047619, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1786587, Length=142, Percent_Identity=33.0985915492958, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 22299; Mature: 22168
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQSTPKTLKEKLGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKASKQSIS CCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH SIFEKDGEKVFRDVEKKVLKEISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRR HHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCHHHCCEEEEEEHHHHH SIKRLESDQKRRPLLLGDNLAENFSQIYESRKPIYLESDLRIEVEDQSPYEVATMVAEHL HHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCEEEECCCEEEECCCCCHHHHHHHHHHC PSILIDPETQAERHTTEL CCEEECCCCHHHHHCCCC >Mature Secondary Structure AVQSTPKTLKEKLGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKASKQSIS CCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH SIFEKDGEKVFRDVEKKVLKEISQHHSLVIATGGGLVTLPENWGILHQGIVIWLDLDLRR HHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCHHHCCEEEEEEHHHHH SIKRLESDQKRRPLLLGDNLAENFSQIYESRKPIYLESDLRIEVEDQSPYEVATMVAEHL HHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCEEEECCCEEEECCCCCHHHHHHHHHHC PSILIDPETQAERHTTEL CCEEECCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA