| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024749
Identifier: 124024749
GI number: 124024749
Start: 37038
End: 38111
Strand: Reverse
Name: 124024749
Synonym: NATL1_00361
Alternate gene names: NA
Gene position: 38111-37038 (Counterclockwise)
Preceding gene: 124024751
Following gene: 124024746
Centisome position: 2.04
GC content: 27.37
Gene sequence:
>1074_bases GTGGACACAGAAAGAAATAATTTAGTTTCAAAAAAAGAGGTCATTAATAGTCTTTATAAAATCATTTGTACAACTACGCA ATCTTCAAGTGATCGAAAAATTGATGACAACTCATATTTTAAAAGAAGAGTTGGGGGTTTTAAAGCAGAAATAGAGTTTG AGAATGAACTAAAAAAAAATACAACCTATAGTTTTTTAAGCGGAGGAATGGTTCTCTCCCCAGAAATAGATGGTACTAAA GATATGAAAAATGAATTCACTTACATAAGTATAGACTCTTTAGCACCAAGCAGTTATGAAGAAGTATATTCAAATATTAT TAATTGGAATGAAATTAAATATTGTTATTACGCACAAATAAACTTTGAAAATTGGGAGTTGGAGGAATTTAATACCAAAG AAAATAAAGGGGATAAAAACACAGTAAAAACACAAATTTTAAAACCTAATTATACACTTTACAAATTTGATAAAGACACT AAAAAATTTAAAAAAACCTTAGTAGATAATTTTTCTGAAGTATTCAGTATTGGGCGTCGAAAAGAAAATACACCAAGTAA ATATCATTTAAGAGAGAAAGATAGATTTGATTATTTTGATGATTATGACTTGAAAACCTTACAAAAAATTTATACTAATA GGTATTTTCTGATGAAAAAGTACTTTAATGTAGTTTTTAACATCATAGATATTGACGGATTTATTATTAAAGATAAAAAA ATAATAATAGTTGAGATCAAAGAAAAATCGCCCAATAAAAACAAAAAGTCACCGGATAATAAGCAATTTTGGTTCTATGG GTGGGATACTAGAAGAATTTTATGGTATGAATTTATTCAAAGAAAAATCGGATTAGATATCCTATACACCGTAAGACAAA CAAATAATAGAAGAGAAAAAGAGTTTATAAAATGGGATTCTATCTTTTTGAATGATTTTTTAAAGGTAGTTTCATGGCAT AAATCGATAGATGGTGGCGGTGGTGAAGGCACATTAATTGCCCCATATAATCACTTTAAAAGTCTTGACCAAGTGTTATC TAAATATAATTTTCAAGGAAAAACTTACGACTAA
Upstream 100 bases:
>100_bases TAAAAAGATTTTTCATAAGAAGATAGATTAAAAGTTATTACCAATAAGATTATCACTTTGATTTTTATAGATAATATCCT ATTAGTTTAAAACTTCAACA
Downstream 100 bases:
>100_bases TCTTCAAAAAGACCTGCTTTAGGGCAGGTTTTTTTGTGCCTTTTTAAATCCTCAGGACAAAAGAATTTGTAGAGAAGTCG TTCATAGATTCTCATCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MDTERNNLVSKKEVINSLYKIICTTTQSSSDRKIDDNSYFKRRVGGFKAEIEFENELKKNTTYSFLSGGMVLSPEIDGTK DMKNEFTYISIDSLAPSSYEEVYSNIINWNEIKYCYYAQINFENWELEEFNTKENKGDKNTVKTQILKPNYTLYKFDKDT KKFKKTLVDNFSEVFSIGRRKENTPSKYHLREKDRFDYFDDYDLKTLQKIYTNRYFLMKKYFNVVFNIIDIDGFIIKDKK IIIVEIKEKSPNKNKKSPDNKQFWFYGWDTRRILWYEFIQRKIGLDILYTVRQTNNRREKEFIKWDSIFLNDFLKVVSWH KSIDGGGGEGTLIAPYNHFKSLDQVLSKYNFQGKTYD
Sequences:
>Translated_357_residues MDTERNNLVSKKEVINSLYKIICTTTQSSSDRKIDDNSYFKRRVGGFKAEIEFENELKKNTTYSFLSGGMVLSPEIDGTK DMKNEFTYISIDSLAPSSYEEVYSNIINWNEIKYCYYAQINFENWELEEFNTKENKGDKNTVKTQILKPNYTLYKFDKDT KKFKKTLVDNFSEVFSIGRRKENTPSKYHLREKDRFDYFDDYDLKTLQKIYTNRYFLMKKYFNVVFNIIDIDGFIIKDKK IIIVEIKEKSPNKNKKSPDNKQFWFYGWDTRRILWYEFIQRKIGLDILYTVRQTNNRREKEFIKWDSIFLNDFLKVVSWH KSIDGGGGEGTLIAPYNHFKSLDQVLSKYNFQGKTYD >Mature_357_residues MDTERNNLVSKKEVINSLYKIICTTTQSSSDRKIDDNSYFKRRVGGFKAEIEFENELKKNTTYSFLSGGMVLSPEIDGTK DMKNEFTYISIDSLAPSSYEEVYSNIINWNEIKYCYYAQINFENWELEEFNTKENKGDKNTVKTQILKPNYTLYKFDKDT KKFKKTLVDNFSEVFSIGRRKENTPSKYHLREKDRFDYFDDYDLKTLQKIYTNRYFLMKKYFNVVFNIIDIDGFIIKDKK IIIVEIKEKSPNKNKKSPDNKQFWFYGWDTRRILWYEFIQRKIGLDILYTVRQTNNRREKEFIKWDSIFLNDFLKVVSWH KSIDGGGGEGTLIAPYNHFKSLDQVLSKYNFQGKTYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42722; Mature: 42722
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTERNNLVSKKEVINSLYKIICTTTQSSSDRKIDDNSYFKRRVGGFKAEIEFENELKKN CCCCHHHCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHCCEEEEEEEHHHHCCC TTYSFLSGGMVLSPEIDGTKDMKNEFTYISIDSLAPSSYEEVYSNIINWNEIKYCYYAQI CCHHHHCCCEEECCCCCCCHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEE NFENWELEEFNTKENKGDKNTVKTQILKPNYTLYKFDKDTKKFKKTLVDNFSEVFSIGRR ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC KENTPSKYHLREKDRFDYFDDYDLKTLQKIYTNRYFLMKKYFNVVFNIIDIDGFIIKDKK CCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHEECCCEEEECCE IIIVEIKEKSPNKNKKSPDNKQFWFYGWDTRRILWYEFIQRKIGLDILYTVRQTNNRREK EEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEEHHCCCCHHH EFIKWDSIFLNDFLKVVSWHKSIDGGGGEGTLIAPYNHFKSLDQVLSKYNFQGKTYD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDTERNNLVSKKEVINSLYKIICTTTQSSSDRKIDDNSYFKRRVGGFKAEIEFENELKKN CCCCHHHCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHCCEEEEEEEHHHHCCC TTYSFLSGGMVLSPEIDGTKDMKNEFTYISIDSLAPSSYEEVYSNIINWNEIKYCYYAQI CCHHHHCCCEEECCCCCCCHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEE NFENWELEEFNTKENKGDKNTVKTQILKPNYTLYKFDKDTKKFKKTLVDNFSEVFSIGRR ECCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCC KENTPSKYHLREKDRFDYFDDYDLKTLQKIYTNRYFLMKKYFNVVFNIIDIDGFIIKDKK CCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHEECCCEEEECCE IIIVEIKEKSPNKNKKSPDNKQFWFYGWDTRRILWYEFIQRKIGLDILYTVRQTNNRREK EEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEEHHCCCCHHH EFIKWDSIFLNDFLKVVSWHKSIDGGGGEGTLIAPYNHFKSLDQVLSKYNFQGKTYD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA