| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is murC
Identifier: 124024734
GI number: 124024734
Start: 23092
End: 24576
Strand: Reverse
Name: murC
Synonym: NATL1_00211
Alternate gene names: 124024734
Gene position: 24576-23092 (Counterclockwise)
Preceding gene: 124024736
Following gene: 124024733
Centisome position: 1.32
GC content: 30.57
Gene sequence:
>1485_bases ATGACGAGTTATCTTTCTAACGACACTGAAGCGAAATTGAAGAAGACAAAGGAGTTACCACCTCATATTCATTTTATAGG AATCGGAGGTATTGGTATGTCTGCTCTGGCAATGATTCTCGCTCAAAAAGGATATTCAATATCTGGCTCTGACCAGAAAA AAAACCTAACTTTAAAAAAATTAGAAGAAAACAAAGTCCACATCTTTCCAACCCAAGTAGAATCGAATATTGATGAAATT CTTAAAGTCCATGGGAAAAACATATTAGTTGTTAAAAGTTCAGCAATACATCGAGATAATTTAGAATTATGTAAAGCAAA AAAATATAATTTAAAAATCAAGCATCGTTCTGAAATATTAGCCTTTTTAATTGAAGAAAAAAAATCAATAATCGTCTCAG GTTCTCATGGTAAAACAACTACAAGTACTTACATTACAACATTATTTTCTTATGCAAATAAGAGTCCAACGGCTATCATC GGCGGAATCGTACCTCTCTACAAAAGCAACTACAGTTTTGGTAAAAGTGAATTTTTAATCGCAGAAGCAGATGAATCAGA TGGATCATTAGTAAAGTTTAATCCAAATATCGGATTAATCACGAATTTAGAACTTGAACATGTTGATCATTATCTAGATC TAGAAGATTTAATAGAAACAATGAAACAGTTTGCTCAAAAGTGTGAATGCCTGATTACCAATTTTGACTGTGATAATCTT AGAGCTAATATACATGGTTCTAAATGGTTTTCGATCCAAAAAATTATTAATATAGATTTTGCACTGATCCCGAAAGAATC TAATGGATGTGAAATTATTGCGGAGTATTATGAAAAAGAAAAGTTTATTGATGTTATAAAAATACCTGTTCCTGGCATAC ACAATTTAAGCAATGCAGCTGCTGCTATAGCTGCATGTAGAGTGGCTGGCATTCTTTTCAAAGATATAAAAAAAGGAATT GAAAAATTAAAGCTACCCTCAAGAAGATTTGAATTTAAAGGATTATGGAGAAACAGATTAATAGTTGAGGATTATGCTCA TCATCCGAGCGAAATTGATGCTGCAATATCAATTGCATCTACTATTATTGAGACAAAACATAAACTCTCAAAAATATTAC CAAGAAGAATAGTTACGATCTTTCAGCCGCATCGATATAGTAGAACTAAAAAGTTTCAAAAGGAATTTGCAAAAACTCTA AGTCAATCTGATTTAGTATTTATAACTCCAATTTACTCTGCTGGAGAAGATAAAATCGAAGGAATAAATAATAAGAGTAT TGGACATGAGTTAAAAAAAATCAAACCTAACCTAGAAATATATACTCCAGATAACAATCAAAATTTGATAAAACTAATAA AAGAAAAGACACTTGAAAACGACTTGATTTTAATTATGGGAGCAGGAGATATTAATCTAATAAGTGAAAATCTATTTTTA GAGTTACTCAATAATAAATTAATCAGCAATGATATAGCCGCTTAA
Upstream 100 bases:
>100_bases CGATGATCATTTTCTGTGCATTTTGAAAAATAATTGAAGCGTTAAGGAAATAAAAAGTCCAAAAACTCTCTAATTCTTTA AAAAATGTGCCTTTATATCA
Downstream 100 bases:
>100_bases TAAATGAATTCCATTAAATTACAGAAAAATATTTCCTTATCAAATTTCACTACTTGGGGAATAGGTGGTCCTGCAGAATG GATTGCTCAACCAAAAAATA
Product: UDP-N-acetylmuramate-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MTSYLSNDTEAKLKKTKELPPHIHFIGIGGIGMSALAMILAQKGYSISGSDQKKNLTLKKLEENKVHIFPTQVESNIDEI LKVHGKNILVVKSSAIHRDNLELCKAKKYNLKIKHRSEILAFLIEEKKSIIVSGSHGKTTTSTYITTLFSYANKSPTAII GGIVPLYKSNYSFGKSEFLIAEADESDGSLVKFNPNIGLITNLELEHVDHYLDLEDLIETMKQFAQKCECLITNFDCDNL RANIHGSKWFSIQKIINIDFALIPKESNGCEIIAEYYEKEKFIDVIKIPVPGIHNLSNAAAAIAACRVAGILFKDIKKGI EKLKLPSRRFEFKGLWRNRLIVEDYAHHPSEIDAAISIASTIIETKHKLSKILPRRIVTIFQPHRYSRTKKFQKEFAKTL SQSDLVFITPIYSAGEDKIEGINNKSIGHELKKIKPNLEIYTPDNNQNLIKLIKEKTLENDLILIMGAGDINLISENLFL ELLNNKLISNDIAA
Sequences:
>Translated_494_residues MTSYLSNDTEAKLKKTKELPPHIHFIGIGGIGMSALAMILAQKGYSISGSDQKKNLTLKKLEENKVHIFPTQVESNIDEI LKVHGKNILVVKSSAIHRDNLELCKAKKYNLKIKHRSEILAFLIEEKKSIIVSGSHGKTTTSTYITTLFSYANKSPTAII GGIVPLYKSNYSFGKSEFLIAEADESDGSLVKFNPNIGLITNLELEHVDHYLDLEDLIETMKQFAQKCECLITNFDCDNL RANIHGSKWFSIQKIINIDFALIPKESNGCEIIAEYYEKEKFIDVIKIPVPGIHNLSNAAAAIAACRVAGILFKDIKKGI EKLKLPSRRFEFKGLWRNRLIVEDYAHHPSEIDAAISIASTIIETKHKLSKILPRRIVTIFQPHRYSRTKKFQKEFAKTL SQSDLVFITPIYSAGEDKIEGINNKSIGHELKKIKPNLEIYTPDNNQNLIKLIKEKTLENDLILIMGAGDINLISENLFL ELLNNKLISNDIAA >Mature_493_residues TSYLSNDTEAKLKKTKELPPHIHFIGIGGIGMSALAMILAQKGYSISGSDQKKNLTLKKLEENKVHIFPTQVESNIDEIL KVHGKNILVVKSSAIHRDNLELCKAKKYNLKIKHRSEILAFLIEEKKSIIVSGSHGKTTTSTYITTLFSYANKSPTAIIG GIVPLYKSNYSFGKSEFLIAEADESDGSLVKFNPNIGLITNLELEHVDHYLDLEDLIETMKQFAQKCECLITNFDCDNLR ANIHGSKWFSIQKIINIDFALIPKESNGCEIIAEYYEKEKFIDVIKIPVPGIHNLSNAAAAIAACRVAGILFKDIKKGIE KLKLPSRRFEFKGLWRNRLIVEDYAHHPSEIDAAISIASTIIETKHKLSKILPRRIVTIFQPHRYSRTKKFQKEFAKTLS QSDLVFITPIYSAGEDKIEGINNKSIGHELKKIKPNLEIYTPDNNQNLIKLIKEKTLENDLILIMGAGDINLISENLFLE LLNNKLISNDIAA
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=480, Percent_Identity=31.6666666666667, Blast_Score=184, Evalue=2e-47, Organism=Escherichia coli, GI1790680, Length=413, Percent_Identity=25.4237288135593, Blast_Score=112, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_PROM1 (A2BZC5)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001013850.1 - ProteinModelPortal: A2BZC5 - SMR: A2BZC5 - STRING: A2BZC5 - GeneID: 4780958 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_00211 - eggNOG: COG0773 - HOGENOM: HBG476594 - OMA: YQPHRYS - ProtClustDB: CLSK716070 - BioCyc: PMAR167555:NATL1_00211-MONOMER - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 55598; Mature: 55467
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSYLSNDTEAKLKKTKELPPHIHFIGIGGIGMSALAMILAQKGYSISGSDQKKNLTLKK CCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEE LEENKVHIFPTQVESNIDEILKVHGKNILVVKSSAIHRDNLELCKAKKYNLKIKHRSEIL ECCCCEEEEECHHHCCHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCCEEEEEHHHHHH AFLIEEKKSIIVSGSHGKTTTSTYITTLFSYANKSPTAIIGGIVPLYKSNYSFGKSEFLI HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCCCCCCEEEE AEADESDGSLVKFNPNIGLITNLELEHVDHYLDLEDLIETMKQFAQKCECLITNFDCDNL EECCCCCCCEEEECCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCCCC RANIHGSKWFSIQKIINIDFALIPKESNGCEIIAEYYEKEKFIDVIKIPVPGIHNLSNAA EECCCCCCEEEEEHEEECCEEEEECCCCCHHHHHHHHHHHHCEEEEEECCCCCCCHHHHH AAIAACRVAGILFKDIKKGIEKLKLPSRRFEFKGLWRNRLIVEDYAHHPSEIDAAISIAS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHCCHHCCCEEEEHHCCCCHHHHHHHHHHH TIIETKHKLSKILPRRIVTIFQPHRYSRTKKFQKEFAKTLSQSDLVFITPIYSAGEDKIE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHC GINNKSIGHELKKIKPNLEIYTPDNNQNLIKLIKEKTLENDLILIMGAGDINLISENLFL CCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHH ELLNNKLISNDIAA HHHHCHHHHCCCCC >Mature Secondary Structure TSYLSNDTEAKLKKTKELPPHIHFIGIGGIGMSALAMILAQKGYSISGSDQKKNLTLKK CCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEE LEENKVHIFPTQVESNIDEILKVHGKNILVVKSSAIHRDNLELCKAKKYNLKIKHRSEIL ECCCCEEEEECHHHCCHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCCEEEEEHHHHHH AFLIEEKKSIIVSGSHGKTTTSTYITTLFSYANKSPTAIIGGIVPLYKSNYSFGKSEFLI HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCCCCCCEEEE AEADESDGSLVKFNPNIGLITNLELEHVDHYLDLEDLIETMKQFAQKCECLITNFDCDNL EECCCCCCCEEEECCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCCCCC RANIHGSKWFSIQKIINIDFALIPKESNGCEIIAEYYEKEKFIDVIKIPVPGIHNLSNAA EECCCCCCEEEEEHEEECCEEEEECCCCCHHHHHHHHHHHHCEEEEEECCCCCCCHHHHH AAIAACRVAGILFKDIKKGIEKLKLPSRRFEFKGLWRNRLIVEDYAHHPSEIDAAISIAS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHCCHHCCCEEEEHHCCCCHHHHHHHHHHH TIIETKHKLSKILPRRIVTIFQPHRYSRTKKFQKEFAKTLSQSDLVFITPIYSAGEDKIE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHC GINNKSIGHELKKIKPNLEIYTPDNNQNLIKLIKEKTLENDLILIMGAGDINLISENLFL CCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHH ELLNNKLISNDIAA HHHHCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA