Click here to switch to the map view.

The map label for this gene is 124024558

Identifier: 124024558

GI number: 124024558

Start: 2540760

End: 2542508

Strand: Reverse

Name: 124024558

Synonym: P9303_28701

Alternate gene names: NA

Gene position: 2542508-2540760 (Counterclockwise)

Preceding gene: 124024559

Following gene: 124024557

Centisome position: 94.78

GC content: 45.34

Gene sequence:

>1749_bases
ATGACTCGCCGCAGAAGAACGGCACTTGCTGCTGCACTCTCTTTGCTGCCAATAGGACAACCTCTGCTCCTGGGCACTCT
TACTGGCACCACAACTGCAACCACAGCAGTCATTCTTCAAGCAGCACCAGTATTTGCTCAGGATGTTTCTGCTGTTGCCC
GTATCGCCAAGGCAATCACTGTTCGCATAGAAGGTGCAACACAAGGTTCAGGGGTGCTCGTCAAGCAAGAAGGCAATCGC
TACACGGTGCTTACGGCATGGCATGTAGTTAGTGGCAATAGACCAGGAGAAGAGGTTGGGATCTATACCTCTGATGGGAA
TGAGCACCAACTAGAGCAAGGCAGCATCCAAAGGTTGGGAGAGGTTGATATGGCAGTGCTCTCCTTCTCTAGTGGCAGTG
CTTATGAGGTGGCAAATGTTGGTGATATCAAAAAGGTCAAGCATGATCAACCCATTTATGTGGCAGGTTTTCCTTTAAAT
AACTCACAAAACCTTCGCTATGAAACTGGAGAGGTTGTTGCTAATGCAGAGGTAGGAATTGATCAGGGGTATCAACTCCT
TTATGACAACACAACAGTCGCTGGAATGAGTGGTGGGGTGCTGCTGAATTCTGATGGAGATTTGGTGGGACTTCATGGCA
GGGGAGAGAGAGATGAACAGGCATCAAGTGGTGAGTTAGTAATGAAGACAGGGGTGAATCAAGGCGTGCCAATTACTTAC
TACAACCTCTTTGCAAGTGGTGCTCCTGTTGTTGTTGCCAAGAACACTGCAACCACTGCTGATGACTATCTGGCGCAAGC
AAAAGCATCCCAGTCAAGGAAGGGAAGAGAGCAGACAGTTATTAAGTTAACAACCCAGGCATTAGCATTGCGATCAAGTG
GAGGAGGATACTTTCTTCGTGCTTATGCCAAGAAGAAATTAAAAGACTATCAAGGAGCAATTGCTGATTACAGCAAGGCA
CTAGAGATTAATCCGGAGGATGCTAATACCTTCAACAACCGTGGTAATGCCAAGCATGGATTAGGAGATTATCAAGGAGC
AATATCTGATTACACCAAGGCAATAGAACTTGATCCACAGCATGCTCTTGCCTACGACAACCGTGGTTATTCCAAGCATG
ACTTAAAAGATTATCAAGCAGCAATTGCAGATTACAACAAAGCAATAGAGATTGATCCGCAGTATGCCATTGCCTACAAC
AACCGTGGTACTGCTAAGGATGATTTAAAAGATTATCAAGGAGCAATCGCTGATTACAACAAGGCAATAGAACTTGATCC
ACAGCATGCCTTTGCCTTCTCCAACCGTGGTATTACCAAGAGAAACTTAGGAGATACTCAAGGAGCAATCGCTGATTACA
ACAAGGCAATAGAGATTAATCCGCAGAATGCCATTGCTTACAACAACCGTGGTCTTGCTAAGAGTAATTTAGGTAGTTAT
CAAGAAGCAATCGCTGATTGCAACAAGGCAATTCAGATTGATCCGCAGTATGCCGGTGCCTACAATAGCCGTGGATGGAT
AAAATATCTACAAGGAGATTTTCAAGGTGCTCTTAAGGATGCTAACAAAGCACTAGCAATTGCTCCAAATGATGGTGCGA
CATTAGACACCCGTGGTCTTGCAAAACATGCGCTTGGTCAAGATAGAAGTGCCTGTAAAGATTTAAAGAGGGCATCGTCT
CTAGGTTATCAGGGAACCTCCCAATATCTACAAAGTGAAGAAGGTGCCTGGTGCAGCAATATGCGATGA

Upstream 100 bases:

>100_bases
CACCTGGTGCCGCAATATGCGATGAGGATATAAAACAACAGCACTCCATCTAGACCTCATAAGACGCCCCACTTACCCTG
AACCCAGCAGCACCCAACAG

Downstream 100 bases:

>100_bases
GGACATAGAACAACAACACCTAGAGACCCAATCAGATCTCCCACTTACCCTTAAAGCATCAGAGCACTTCCTTGATGACA
CGCCGAACCACTGCCATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 582; Mature: 581

Protein sequence:

>582_residues
MTRRRRTALAAALSLLPIGQPLLLGTLTGTTTATTAVILQAAPVFAQDVSAVARIAKAITVRIEGATQGSGVLVKQEGNR
YTVLTAWHVVSGNRPGEEVGIYTSDGNEHQLEQGSIQRLGEVDMAVLSFSSGSAYEVANVGDIKKVKHDQPIYVAGFPLN
NSQNLRYETGEVVANAEVGIDQGYQLLYDNTTVAGMSGGVLLNSDGDLVGLHGRGERDEQASSGELVMKTGVNQGVPITY
YNLFASGAPVVVAKNTATTADDYLAQAKASQSRKGREQTVIKLTTQALALRSSGGGYFLRAYAKKKLKDYQGAIADYSKA
LEINPEDANTFNNRGNAKHGLGDYQGAISDYTKAIELDPQHALAYDNRGYSKHDLKDYQAAIADYNKAIEIDPQYAIAYN
NRGTAKDDLKDYQGAIADYNKAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGSY
QEAIADCNKAIQIDPQYAGAYNSRGWIKYLQGDFQGALKDANKALAIAPNDGATLDTRGLAKHALGQDRSACKDLKRASS
LGYQGTSQYLQSEEGAWCSNMR

Sequences:

>Translated_582_residues
MTRRRRTALAAALSLLPIGQPLLLGTLTGTTTATTAVILQAAPVFAQDVSAVARIAKAITVRIEGATQGSGVLVKQEGNR
YTVLTAWHVVSGNRPGEEVGIYTSDGNEHQLEQGSIQRLGEVDMAVLSFSSGSAYEVANVGDIKKVKHDQPIYVAGFPLN
NSQNLRYETGEVVANAEVGIDQGYQLLYDNTTVAGMSGGVLLNSDGDLVGLHGRGERDEQASSGELVMKTGVNQGVPITY
YNLFASGAPVVVAKNTATTADDYLAQAKASQSRKGREQTVIKLTTQALALRSSGGGYFLRAYAKKKLKDYQGAIADYSKA
LEINPEDANTFNNRGNAKHGLGDYQGAISDYTKAIELDPQHALAYDNRGYSKHDLKDYQAAIADYNKAIEIDPQYAIAYN
NRGTAKDDLKDYQGAIADYNKAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGSY
QEAIADCNKAIQIDPQYAGAYNSRGWIKYLQGDFQGALKDANKALAIAPNDGATLDTRGLAKHALGQDRSACKDLKRASS
LGYQGTSQYLQSEEGAWCSNMR
>Mature_581_residues
TRRRRTALAAALSLLPIGQPLLLGTLTGTTTATTAVILQAAPVFAQDVSAVARIAKAITVRIEGATQGSGVLVKQEGNRY
TVLTAWHVVSGNRPGEEVGIYTSDGNEHQLEQGSIQRLGEVDMAVLSFSSGSAYEVANVGDIKKVKHDQPIYVAGFPLNN
SQNLRYETGEVVANAEVGIDQGYQLLYDNTTVAGMSGGVLLNSDGDLVGLHGRGERDEQASSGELVMKTGVNQGVPITYY
NLFASGAPVVVAKNTATTADDYLAQAKASQSRKGREQTVIKLTTQALALRSSGGGYFLRAYAKKKLKDYQGAIADYSKAL
EINPEDANTFNNRGNAKHGLGDYQGAISDYTKAIELDPQHALAYDNRGYSKHDLKDYQAAIADYNKAIEIDPQYAIAYNN
RGTAKDDLKDYQGAIADYNKAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGSYQ
EAIADCNKAIQIDPQYAGAYNSRGWIKYLQGDFQGALKDANKALAIAPNDGATLDTRGLAKHALGQDRSACKDLKRASSL
GYQGTSQYLQSEEGAWCSNMR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=289, Percent_Identity=31.1418685121107, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI32307150, Length=289, Percent_Identity=31.1418685121107, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI310123097, Length=246, Percent_Identity=30.0813008130081, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI310131789, Length=246, Percent_Identity=30.0813008130081, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI310110582, Length=246, Percent_Identity=30.0813008130081, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI170784867, Length=243, Percent_Identity=27.5720164609054, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI24308141, Length=171, Percent_Identity=31.5789473684211, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI225735593, Length=256, Percent_Identity=25, Blast_Score=80, Evalue=8e-15,
Organism=Homo sapiens, GI225735591, Length=256, Percent_Identity=25, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI118766328, Length=236, Percent_Identity=27.9661016949153, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI118766330, Length=236, Percent_Identity=27.9661016949153, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI296531396, Length=218, Percent_Identity=22.9357798165138, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI167466177, Length=190, Percent_Identity=25.7894736842105, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI167466175, Length=190, Percent_Identity=25.7894736842105, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI4506921, Length=117, Percent_Identity=35.8974358974359, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI5803181, Length=232, Percent_Identity=27.1551724137931, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI301336134, Length=225, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI83415184, Length=225, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI225735595, Length=228, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI54607135, Length=197, Percent_Identity=28.9340101522843, Blast_Score=67, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=216, Percent_Identity=32.4074074074074, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI115532692, Length=216, Percent_Identity=32.4074074074074, Blast_Score=104, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17563052, Length=230, Percent_Identity=22.6086956521739, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6319387, Length=190, Percent_Identity=27.3684210526316, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324601, Length=267, Percent_Identity=26.5917602996255, Blast_Score=71, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6324580, Length=83, Percent_Identity=43.3734939759036, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI17647755, Length=266, Percent_Identity=30.4511278195489, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24585827, Length=266, Percent_Identity=30.4511278195489, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24585829, Length=266, Percent_Identity=30.4511278195489, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24583797, Length=208, Percent_Identity=25.4807692307692, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24583795, Length=208, Percent_Identity=25.4807692307692, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24583793, Length=208, Percent_Identity=25.4807692307692, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17137540, Length=264, Percent_Identity=24.6212121212121, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 62565; Mature: 62434

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRRRTALAAALSLLPIGQPLLLGTLTGTTTATTAVILQAAPVFAQDVSAVARIAKAIT
CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEE
VRIEGATQGSGVLVKQEGNRYTVLTAWHVVSGNRPGEEVGIYTSDGNEHQLEQGSIQRLG
EEEECCCCCCCEEEEECCCEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHC
EVDMAVLSFSSGSAYEVANVGDIKKVKHDQPIYVAGFPLNNSQNLRYETGEVVANAEVGI
CCEEEEEEECCCCCEEECCCCCHHHHCCCCCEEEEEECCCCCCCCEEECCCEEEECCCCC
DQGYQLLYDNTTVAGMSGGVLLNSDGDLVGLHGRGERDEQASSGELVMKTGVNQGVPITY
CCCCEEEECCCEEECCCCCEEECCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEE
YNLFASGAPVVVAKNTATTADDYLAQAKASQSRKGREQTVIKLTTQALALRSSGGGYFLR
EEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHEEEEEEEHHHEEECCCCCEEEH
AYAKKKLKDYQGAIADYSKALEINPEDANTFNNRGNAKHGLGDYQGAISDYTKAIELDPQ
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCC
HALAYDNRGYSKHDLKDYQAAIADYNKAIEIDPQYAIAYNNRGTAKDDLKDYQGAIADYN
HHEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCC
KAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGSY
CEEEECCCHHEEECCCCCCCCCCCCCCCCHHCCCCEEEECCCCEEEECCCCCCCCCCCHH
QEAIADCNKAIQIDPQYAGAYNSRGWIKYLQGDFQGALKDANKALAIAPNDGATLDTRGL
HHHHHCCCCEEEECCHHCCCCCCCCHHEEHHHHHHHHHHCCCCEEEEECCCCCEECCHHH
AKHALGQDRSACKDLKRASSLGYQGTSQYLQSEEGAWCSNMR
HHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TRRRRTALAAALSLLPIGQPLLLGTLTGTTTATTAVILQAAPVFAQDVSAVARIAKAIT
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEE
VRIEGATQGSGVLVKQEGNRYTVLTAWHVVSGNRPGEEVGIYTSDGNEHQLEQGSIQRLG
EEEECCCCCCCEEEEECCCEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHC
EVDMAVLSFSSGSAYEVANVGDIKKVKHDQPIYVAGFPLNNSQNLRYETGEVVANAEVGI
CCEEEEEEECCCCCEEECCCCCHHHHCCCCCEEEEEECCCCCCCCEEECCCEEEECCCCC
DQGYQLLYDNTTVAGMSGGVLLNSDGDLVGLHGRGERDEQASSGELVMKTGVNQGVPITY
CCCCEEEECCCEEECCCCCEEECCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEE
YNLFASGAPVVVAKNTATTADDYLAQAKASQSRKGREQTVIKLTTQALALRSSGGGYFLR
EEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHEEEEEEEHHHEEECCCCCEEEH
AYAKKKLKDYQGAIADYSKALEINPEDANTFNNRGNAKHGLGDYQGAISDYTKAIELDPQ
HHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCC
HALAYDNRGYSKHDLKDYQAAIADYNKAIEIDPQYAIAYNNRGTAKDDLKDYQGAIADYN
HHEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCC
KAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGSY
CEEEECCCHHEEECCCCCCCCCCCCCCCCHHCCCCEEEECCCCEEEECCCCCCCCCCCHH
QEAIADCNKAIQIDPQYAGAYNSRGWIKYLQGDFQGALKDANKALAIAPNDGATLDTRGL
HHHHHCCCCEEEECCHHCCCCCCCCHHEEHHHHHHHHHHCCCCEEEEECCCCCEECCHHH
AKHALGQDRSACKDLKRASSLGYQGTSQYLQSEEGAWCSNMR
HHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]