Click here to switch to the map view.

The map label for this gene is 124024557

Identifier: 124024557

GI number: 124024557

Start: 2539765

End: 2540685

Strand: Reverse

Name: 124024557

Synonym: P9303_28691

Alternate gene names: NA

Gene position: 2540685-2539765 (Counterclockwise)

Preceding gene: 124024558

Following gene: 124024556

Centisome position: 94.71

GC content: 44.52

Gene sequence:

>921_bases
ATGACACGCCGAACCACTGCCATTGCTGCTGCACTATCGCTTCTGCCGTTAGGACAACCGCTGCTACTGGGATCTACTTC
TGCTCTAGCAACTGCGGCGGTGGTGCTTTCAACCCAGGTAGCAGATGCTCAAAGTGCGGCAGTTTTTAATAAACGCGGAT
ATGCAAAATTTAATAAAGGTGATTATCAAGGAGCACTTGCTGAATTCAATAAGGCAATTGAAATTAATCCGCAAGATGCC
GGTGCCTATACCAGTCGTAGTGGTACAAAATTAAATTTAGGCGACAACCAAGGAGCGCTGAATGATGCTAATAAGGCAAT
AGATATTAATCCGCAAAACTCCATTGCCTATTACAATCGTGGTAGTGCAAAGGATGAATTAGGAGACTATCAAGGAGCAA
TTGCTGATTTTAATAAGGCAATAGAGATTAATCCGCAGGATGCCGATGCCTACCTCAACCGCGGTAATGCCAAGTATGAC
TTAAAAGATACTCAAGGAGCAATTGCTGATTGGGGTAAGGCGATAGAGATTAATCCGCAGTATGCCGGTGCCTATACAAA
TCGCGGCGCTGCCAAATTAAATTCAAAAGATTATAAAGGAGCAATATCTGATTTCAATAAGGCAATAGAGATTAACCCGC
ATCTTGCCGCTGCCTACTTCAACCGCGGTCTTGCCAAGAGGAAATTAGGAGACTATCAAGGAGCAATTCCTGATTACAAG
AAGGCAATAGAGATTAATCCGCAGTATGCCGCTGCCTACAGAAACAGCGGGATTGCCAAGGAATTAGTTGGAGACCTAAA
AGGAGCTTGTGCTGATTGGAAAGAAGCATCATCTCTTGGAGATAAAGATGCTGCTGGGTGGGTAAGGAAGGAATGCCAAT
CCCCTCAAAGTGCACCTCAAAGAAATGAGCCGTTGTGGTGA

Upstream 100 bases:

>100_bases
GTGCCTGGTGCAGCAATATGCGATGAGGACATAGAACAACAACACCTAGAGACCCAATCAGATCTCCCACTTACCCTTAA
AGCATCAGAGCACTTCCTTG

Downstream 100 bases:

>100_bases
GACAGGAAGTCTGAAAATGGCGAAGGGGCCGCTCTAAAAAATCTCGACGAAAAACGAAGCCCCCCTGCCTACCATTAAAA
ACATCAGCACCCAGCAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTRRTTAIAAALSLLPLGQPLLLGSTSALATAAVVLSTQVADAQSAAVFNKRGYAKFNKGDYQGALAEFNKAIEINPQDA
GAYTSRSGTKLNLGDNQGALNDANKAIDINPQNSIAYYNRGSAKDELGDYQGAIADFNKAIEINPQDADAYLNRGNAKYD
LKDTQGAIADWGKAIEINPQYAGAYTNRGAAKLNSKDYKGAISDFNKAIEINPHLAAAYFNRGLAKRKLGDYQGAIPDYK
KAIEINPQYAAAYRNSGIAKELVGDLKGACADWKEASSLGDKDAAGWVRKECQSPQSAPQRNEPLW

Sequences:

>Translated_306_residues
MTRRTTAIAAALSLLPLGQPLLLGSTSALATAAVVLSTQVADAQSAAVFNKRGYAKFNKGDYQGALAEFNKAIEINPQDA
GAYTSRSGTKLNLGDNQGALNDANKAIDINPQNSIAYYNRGSAKDELGDYQGAIADFNKAIEINPQDADAYLNRGNAKYD
LKDTQGAIADWGKAIEINPQYAGAYTNRGAAKLNSKDYKGAISDFNKAIEINPHLAAAYFNRGLAKRKLGDYQGAIPDYK
KAIEINPQYAAAYRNSGIAKELVGDLKGACADWKEASSLGDKDAAGWVRKECQSPQSAPQRNEPLW
>Mature_305_residues
TRRTTAIAAALSLLPLGQPLLLGSTSALATAAVVLSTQVADAQSAAVFNKRGYAKFNKGDYQGALAEFNKAIEINPQDAG
AYTSRSGTKLNLGDNQGALNDANKAIDINPQNSIAYYNRGSAKDELGDYQGAIADFNKAIEINPQDADAYLNRGNAKYDL
KDTQGAIADWGKAIEINPQYAGAYTNRGAAKLNSKDYKGAISDFNKAIEINPHLAAAYFNRGLAKRKLGDYQGAIPDYKK
AIEINPQYAAAYRNSGIAKELVGDLKGACADWKEASSLGDKDAAGWVRKECQSPQSAPQRNEPLW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI310123097, Length=229, Percent_Identity=31.4410480349345, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI310110582, Length=229, Percent_Identity=31.4410480349345, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI310131789, Length=229, Percent_Identity=31.4410480349345, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI32307148, Length=218, Percent_Identity=27.9816513761468, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI32307150, Length=218, Percent_Identity=27.9816513761468, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI167466175, Length=205, Percent_Identity=26.3414634146341, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI167466177, Length=205, Percent_Identity=26.3414634146341, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI21450645, Length=209, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI170784867, Length=220, Percent_Identity=24.5454545454545, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI5803181, Length=234, Percent_Identity=25.6410256410256, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI4506921, Length=114, Percent_Identity=35.0877192982456, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI225735591, Length=269, Percent_Identity=26.0223048327138, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI225735593, Length=264, Percent_Identity=26.1363636363636, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI54607135, Length=188, Percent_Identity=27.1276595744681, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=270, Percent_Identity=27.4074074074074, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI115532690, Length=270, Percent_Identity=27.4074074074074, Blast_Score=89, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6319387, Length=190, Percent_Identity=25.2631578947368, Blast_Score=66, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6324601, Length=195, Percent_Identity=25.1282051282051, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17647755, Length=218, Percent_Identity=27.5229357798165, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24585827, Length=218, Percent_Identity=27.5229357798165, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24585829, Length=218, Percent_Identity=27.5229357798165, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24647123, Length=209, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 32775; Mature: 32643

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRTTAIAAALSLLPLGQPLLLGSTSALATAAVVLSTQVADAQSAAVFNKRGYAKFNKG
CCCHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCC
DYQGALAEFNKAIEINPQDAGAYTSRSGTKLNLGDNQGALNDANKAIDINPQNSIAYYNR
CCCHHHHHCCCEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEEEEC
GSAKDELGDYQGAIADFNKAIEINPQDADAYLNRGNAKYDLKDTQGAIADWGKAIEINPQ
CCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCEEECCCCCCCHHHCCCEEEECCC
YAGAYTNRGAAKLNSKDYKGAISDFNKAIEINPHLAAAYFNRGLAKRKLGDYQGAIPDYK
CCCCCCCCCCHHCCCCCCCCHHHHCCCEEECCCCHHHHHHHCCHHHHHHCCCCCCCCCCH
KAIEINPQYAAAYRNSGIAKELVGDLKGACADWKEASSLGDKDAAGWVRKECQSPQSAPQ
HEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCCCCCC
RNEPLW
CCCCCC
>Mature Secondary Structure 
TRRTTAIAAALSLLPLGQPLLLGSTSALATAAVVLSTQVADAQSAAVFNKRGYAKFNKG
CCHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCC
DYQGALAEFNKAIEINPQDAGAYTSRSGTKLNLGDNQGALNDANKAIDINPQNSIAYYNR
CCCHHHHHCCCEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEEEEC
GSAKDELGDYQGAIADFNKAIEINPQDADAYLNRGNAKYDLKDTQGAIADWGKAIEINPQ
CCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCEEECCCCCCCHHHCCCEEEECCC
YAGAYTNRGAAKLNSKDYKGAISDFNKAIEINPHLAAAYFNRGLAKRKLGDYQGAIPDYK
CCCCCCCCCCHHCCCCCCCCHHHHCCCEEECCCCHHHHHHHCCHHHHHHCCCCCCCCCCH
KAIEINPQYAAAYRNSGIAKELVGDLKGACADWKEASSLGDKDAAGWVRKECQSPQSAPQ
HEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCCCCCC
RNEPLW
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368342; 8905231 [H]