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The map label for this gene is yrbE [H]

Identifier: 124024182

GI number: 124024182

Start: 2189819

End: 2190841

Strand: Reverse

Name: yrbE [H]

Synonym: P9303_24931

Alternate gene names: 124024182

Gene position: 2190841-2189819 (Counterclockwise)

Preceding gene: 124024183

Following gene: 124024181

Centisome position: 81.67

GC content: 55.43

Gene sequence:

>1023_bases
ATGCGCCATGGCTTGCCGATGACCGATCCCATGGTTCCGGTGAAGGTCGGTGTGATCGGGATTGGCAATATGGGTTGGCA
TCATGCCCGTGTGCTCAGTCTGCTTAAGGATGCGCAGCTGGTGGCAGTCGCTGATCCCGATCCTGAGCGTGGTCAGCTGG
CAACTGAACAGTTTGGATGCGATTGGTTTCCTGACTACCACAGCTTGCTAGGCGAGGTCGAAGCGGTCTGCATTGCTGTG
CCGACATTGCTCCATCACAAGGTCGGGCAGGCCTGCTTGGAGGCAGGCCTGCATGTGTTAATCGAAAAACCGATTGCGGC
CAGTCAGGAGGAGGCATCCGCATTGATTGTGGCGGCTAATAAGGCTGGACGGCTCTTGCAGGTTGGCCATATTGAACGTT
TTAACCCTGCCTTTCGAGAGTTGATCAAGGTGGTGGAAAATGAGGAGGTGGTGGTTCTTGAGGCTCGTCGCCATAGCCCC
CATGGTGACCGAGCCAATGATGTGTCGGTGGTGCTTGATCTGATGATTCATGACCTCGACTTGGTTCTTGAGCTGGCGGG
TGCTCCGGTGGTAGGTCTTGCTGCTGCAGGGGGCCGCACTGCCGAGGGTCCGATCGATTACGTCAATGCCACGCTTGGCT
TCAGCAATGGTGTGGTGGCTAGCCTCACGGCTAGCAAGATGAGCCACCGCAAAATTCGCAGTCTCAGTGCTCATTGTCGG
GGCAGTCTTGTTGAGACTGATTTCCTTAATCACACCTTGCATATACATCGTCGTGCTCATGAGTGGTATTCAGCCGATCA
CGGTGAGTTGTTGTATCGCAATGACGGTTTTATCGAAGAGGTCAGCACGACTTCTATTGAGCCTCTCTATGCCGAGTTGG
AGCATTTTCTTCAGTGTTTGCGAGGTCGTGAGACACCAGCCGTGGATGGGGAGCAGGCTTCGCGCGCGCTGCGTTTGGCT
GACCTGATTGAACATGCCGTCGAACACCCCGGCATGGGGCTTTCCTTGGAGGAGCCCATCTGA

Upstream 100 bases:

>100_bases
GTTCGAGATCGTAACGATGAAGGGTCCTCGTATCGAGCGTGTGCGACTGATTCTTCCCAGTCACGATCACACTGAGGAAT
GATCGTTGATAATTTCCCCG

Downstream 100 bases:

>100_bases
ATCGTTAGCAACACATCAGTCCAACCCTCCCGGCTCGCAAAGAGCTACTTTCTCAGGGGCTTCTCTGCAAACCGGCTGTT
GCTCCATTCGCTTGCTTGTG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRHGLPMTDPMVPVKVGVIGIGNMGWHHARVLSLLKDAQLVAVADPDPERGQLATEQFGCDWFPDYHSLLGEVEAVCIAV
PTLLHHKVGQACLEAGLHVLIEKPIAASQEEASALIVAANKAGRLLQVGHIERFNPAFRELIKVVENEEVVVLEARRHSP
HGDRANDVSVVLDLMIHDLDLVLELAGAPVVGLAAAGGRTAEGPIDYVNATLGFSNGVVASLTASKMSHRKIRSLSAHCR
GSLVETDFLNHTLHIHRRAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCLRGRETPAVDGEQASRALRLA
DLIEHAVEHPGMGLSLEEPI

Sequences:

>Translated_340_residues
MRHGLPMTDPMVPVKVGVIGIGNMGWHHARVLSLLKDAQLVAVADPDPERGQLATEQFGCDWFPDYHSLLGEVEAVCIAV
PTLLHHKVGQACLEAGLHVLIEKPIAASQEEASALIVAANKAGRLLQVGHIERFNPAFRELIKVVENEEVVVLEARRHSP
HGDRANDVSVVLDLMIHDLDLVLELAGAPVVGLAAAGGRTAEGPIDYVNATLGFSNGVVASLTASKMSHRKIRSLSAHCR
GSLVETDFLNHTLHIHRRAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCLRGRETPAVDGEQASRALRLA
DLIEHAVEHPGMGLSLEEPI
>Mature_340_residues
MRHGLPMTDPMVPVKVGVIGIGNMGWHHARVLSLLKDAQLVAVADPDPERGQLATEQFGCDWFPDYHSLLGEVEAVCIAV
PTLLHHKVGQACLEAGLHVLIEKPIAASQEEASALIVAANKAGRLLQVGHIERFNPAFRELIKVVENEEVVVLEARRHSP
HGDRANDVSVVLDLMIHDLDLVLELAGAPVVGLAAAGGRTAEGPIDYVNATLGFSNGVVASLTASKMSHRKIRSLSAHCR
GSLVETDFLNHTLHIHRRAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCLRGRETPAVDGEQASRALRLA
DLIEHAVEHPGMGLSLEEPI

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=228, Percent_Identity=27.1929824561404, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787574, Length=195, Percent_Identity=29.2307692307692, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37055; Mature: 37055

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHGLPMTDPMVPVKVGVIGIGNMGWHHARVLSLLKDAQLVAVADPDPERGQLATEQFGC
CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCC
DWFPDYHSLLGEVEAVCIAVPTLLHHKVGQACLEAGLHVLIEKPIAASQEEASALIVAAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCEEEEEEC
KAGRLLQVGHIERFNPAFRELIKVVENEEVVVLEARRHSPHGDRANDVSVVLDLMIHDLD
CCCCEEEECCCHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
LVLELAGAPVVGLAAAGGRTAEGPIDYVNATLGFSNGVVASLTASKMSHRKIRSLSAHCR
HHHHHHCCCEEEEECCCCCCCCCCHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHC
GSLVETDFLNHTLHIHRRAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH
RGRETPAVDGEQASRALRLADLIEHAVEHPGMGLSLEEPI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRHGLPMTDPMVPVKVGVIGIGNMGWHHARVLSLLKDAQLVAVADPDPERGQLATEQFGC
CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCC
DWFPDYHSLLGEVEAVCIAVPTLLHHKVGQACLEAGLHVLIEKPIAASQEEASALIVAAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCEEEEEEC
KAGRLLQVGHIERFNPAFRELIKVVENEEVVVLEARRHSPHGDRANDVSVVLDLMIHDLD
CCCCEEEECCCHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
LVLELAGAPVVGLAAAGGRTAEGPIDYVNATLGFSNGVVASLTASKMSHRKIRSLSAHCR
HHHHHHCCCEEEEECCCCCCCCCCHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHC
GSLVETDFLNHTLHIHRRAHEWYSADHGELLYRNDGFIEEVSTTSIEPLYAELEHFLQCL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHH
RGRETPAVDGEQASRALRLADLIEHAVEHPGMGLSLEEPI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]