| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023992
Identifier: 124023992
GI number: 124023992
Start: 2030586
End: 2032223
Strand: Reverse
Name: 124023992
Synonym: P9303_22991
Alternate gene names: NA
Gene position: 2032223-2030586 (Counterclockwise)
Preceding gene: 124023993
Following gene: 124023991
Centisome position: 75.75
GC content: 57.02
Gene sequence:
>1638_bases ATGAAGCCAAAGCGTATTACTGATGATCTCGACCGATTGTTGGATTTGTTGCCTCTTGCGGTTCAGCAGGCTTTGGCGAC ACCCAATAGCCGGGAGCAGTTACTCGAGGTGGTCTTGGATCTCGGCAGAGTGCCTGAAGCACGCTATCCGGGACGGGCGC TTGCTTTAGGAGAGCAGTGCCTCACGCGCGATGATCTGCAAACCACTGTTGATCGGTTGGGCCAGTTTGGTGCTGACAAC CGTGCTGGCATTGAACGAACTCTGCATCGCATCAGTGCTATTCGTAATCGCCAGCGAGAGGTGGTGGGCCTCACCTGCCG TGTGGGAAGGGCCGTTTTTGGCACCGTGGCGATGGTGAGAGATTTGCTGGATAGTGGTCAATCGCTCTTGCTGATGGGGC GCCCCGGAGTTGGTAAGACCACCGCGCTGCGTGAGATTGCCAGGGTTCTTGCTGATGATCTGCAGCGCAGGGTTGTGGTG ATTGACACTAGTAACGAGATTGCTGGTGACGGGGATATACCCCATCCAGCTATTGGTCGGGCCAGGCGCATGCAAGTGTC TCTGCCAGAGCAACAACATCAGGTCATGATTGAGGCCGTGGAGAACCACATGCCGGAAGTCATCGTGATTGATGAAATCG GTACGGAGCTAGAGGCTCAGGCTGCGCGCACGATCGCTGAACGGGGGGTGCAGCTTGTGGCTACGGCCCATGGCAATGCT TTGCCGAATTTGATCAAGAATCCAACCCTTAGTGATCTTGTTGGCGGGATTCAGGCTGTCACTCTTGGAGATGAAGAGGC AAGGCGGCGACGCACGCAGAAGACTGTGCTTGAGAGGGCTGCTGAGCCCACTTTCCCTGTGGCAGTTGAAATCAATACTC GCAATCGTTGGTCGATTCATGCCGACGTGGCTGCCACTGTTGATCAGTTGCTGCGCGGACAGTTGCCACGCCCCCAGTTG CGGGAGCTGGACTCTGATGGATCGGTGCGGCTCGTGGATGCGCAGCCGAGTCGATCATCTTCACCACGTCCTGCTCTGGC GGCGGTCCCTCTGCCGGATCCAAAAGCACCTTCTCCTAGAGCGGCCCCCCCCGCTCAAGATCCTGCTGAGGCGATCTCTG CTGAGCGTTCAGATCAAAGAGCACTGCAGGTGCTCTGTTGTGGAATCACGCCCCAGCTGGTGGATGAGGCTATTCGTCGT CATGGCTGGCCTGTTCGTTGGGTGGATGACCTCAATGAGGCTGACGTTGTGCTCAGCATCCGTAAGGGACTCGGCCATCA GCCAACTCTGAGACGTCAGGCGCGTGAATCACGTGTGCCGGTCCTTGTGATTAAGTCCGACACATTGCCTCAGGTAGAGC GTGCTCTGGAGCGGCTGTTAGCACGCCGCGCTGGGCCGCAAGATCAGCTCTCACATTCAGAGTCTCAGGATGGTGATCAG GAAGATGCCCTGGCTGCACTTGAAGAGTGCAGATTGGCTGTGGAAAAAGTAGTGCTGCCCTATGGACGGCCGGTGGAGCT CTTACCCCGTAGCGAGCAGGTTCGTCAGATGCAGGTTGATTTGGTGACTCGCTATCGCCTCAGTAGTGATGTTTTCGGCC AGGCGGAACAACAGCGATTGCGGGTTTATCCCCCTTGA
Upstream 100 bases:
>100_bases AGAGCAGCTTGTTCGTCCATGGCTGTTCCGCCAATCTGGGTCGTAAGCCTGCTAGAAGGCCGTTAGGGGAGCCATTTCTG CATGGCTGCGGCTGAGGGCC
Downstream 100 bases:
>100_bases AATGGCTCTGCTTGATCAGCATGCATTGACGAAGGTGGCTTCAATGTGGGTAACTATCTGGATTCCAGTGAAGTCTCCTC TGCGCGGCTAATGATCTGGA
Product: ATPase AAA
Products: NA
Alternate protein names: AAA ATPase; R3H Domain Protein; ATPase; R3H Domain-Containing Protein; AAA ATPase Superfamily Protein; ATPase-Like Protein; AAA ATPase Central Domain Protein; ATPase Like Protein
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MKPKRITDDLDRLLDLLPLAVQQALATPNSREQLLEVVLDLGRVPEARYPGRALALGEQCLTRDDLQTTVDRLGQFGADN RAGIERTLHRISAIRNRQREVVGLTCRVGRAVFGTVAMVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLQRRVVV IDTSNEIAGDGDIPHPAIGRARRMQVSLPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVQLVATAHGNA LPNLIKNPTLSDLVGGIQAVTLGDEEARRRRTQKTVLERAAEPTFPVAVEINTRNRWSIHADVAATVDQLLRGQLPRPQL RELDSDGSVRLVDAQPSRSSSPRPALAAVPLPDPKAPSPRAAPPAQDPAEAISAERSDQRALQVLCCGITPQLVDEAIRR HGWPVRWVDDLNEADVVLSIRKGLGHQPTLRRQARESRVPVLVIKSDTLPQVERALERLLARRAGPQDQLSHSESQDGDQ EDALAALEECRLAVEKVVLPYGRPVELLPRSEQVRQMQVDLVTRYRLSSDVFGQAEQQRLRVYPP
Sequences:
>Translated_545_residues MKPKRITDDLDRLLDLLPLAVQQALATPNSREQLLEVVLDLGRVPEARYPGRALALGEQCLTRDDLQTTVDRLGQFGADN RAGIERTLHRISAIRNRQREVVGLTCRVGRAVFGTVAMVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLQRRVVV IDTSNEIAGDGDIPHPAIGRARRMQVSLPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVQLVATAHGNA LPNLIKNPTLSDLVGGIQAVTLGDEEARRRRTQKTVLERAAEPTFPVAVEINTRNRWSIHADVAATVDQLLRGQLPRPQL RELDSDGSVRLVDAQPSRSSSPRPALAAVPLPDPKAPSPRAAPPAQDPAEAISAERSDQRALQVLCCGITPQLVDEAIRR HGWPVRWVDDLNEADVVLSIRKGLGHQPTLRRQARESRVPVLVIKSDTLPQVERALERLLARRAGPQDQLSHSESQDGDQ EDALAALEECRLAVEKVVLPYGRPVELLPRSEQVRQMQVDLVTRYRLSSDVFGQAEQQRLRVYPP >Mature_545_residues MKPKRITDDLDRLLDLLPLAVQQALATPNSREQLLEVVLDLGRVPEARYPGRALALGEQCLTRDDLQTTVDRLGQFGADN RAGIERTLHRISAIRNRQREVVGLTCRVGRAVFGTVAMVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLQRRVVV IDTSNEIAGDGDIPHPAIGRARRMQVSLPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVQLVATAHGNA LPNLIKNPTLSDLVGGIQAVTLGDEEARRRRTQKTVLERAAEPTFPVAVEINTRNRWSIHADVAATVDQLLRGQLPRPQL RELDSDGSVRLVDAQPSRSSSPRPALAAVPLPDPKAPSPRAAPPAQDPAEAISAERSDQRALQVLCCGITPQLVDEAIRR HGWPVRWVDDLNEADVVLSIRKGLGHQPTLRRQARESRVPVLVIKSDTLPQVERALERLLARRAGPQDQLSHSESQDGDQ EDALAALEECRLAVEKVVLPYGRPVELLPRSEQVRQMQVDLVTRYRLSSDVFGQAEQQRLRVYPP
Specific function: Unknown
COG id: COG3854
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60157; Mature: 60157
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKRITDDLDRLLDLLPLAVQQALATPNSREQLLEVVLDLGRVPEARYPGRALALGEQC CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH LTRDDLQTTVDRLGQFGADNRAGIERTLHRISAIRNRQREVVGLTCRVGRAVFGTVAMVR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLDSGQSLLLMGRPGVGKTTALREIARVLADDLQRRVVVIDTSNEIAGDGDIPHPAIGR HHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHCC ARRMQVSLPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVQLVATAHGNA CCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCC LPNLIKNPTLSDLVGGIQAVTLGDEEARRRRTQKTVLERAAEPTFPVAVEINTRNRWSIH CHHHHCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE ADVAATVDQLLRGQLPRPQLRELDSDGSVRLVDAQPSRSSSPRPALAAVPLPDPKAPSPR HHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCC AAPPAQDPAEAISAERSDQRALQVLCCGITPQLVDEAIRRHGWPVRWVDDLNEADVVLSI CCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHH RKGLGHQPTLRRQARESRVPVLVIKSDTLPQVERALERLLARRAGPQDQLSHSESQDGDQ HHCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCH EDALAALEECRLAVEKVVLPYGRPVELLPRSEQVRQMQVDLVTRYRLSSDVFGQAEQQRL HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RVYPP CCCCC >Mature Secondary Structure MKPKRITDDLDRLLDLLPLAVQQALATPNSREQLLEVVLDLGRVPEARYPGRALALGEQC CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH LTRDDLQTTVDRLGQFGADNRAGIERTLHRISAIRNRQREVVGLTCRVGRAVFGTVAMVR HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLDSGQSLLLMGRPGVGKTTALREIARVLADDLQRRVVVIDTSNEIAGDGDIPHPAIGR HHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHCC ARRMQVSLPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVQLVATAHGNA CCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCC LPNLIKNPTLSDLVGGIQAVTLGDEEARRRRTQKTVLERAAEPTFPVAVEINTRNRWSIH CHHHHCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE ADVAATVDQLLRGQLPRPQLRELDSDGSVRLVDAQPSRSSSPRPALAAVPLPDPKAPSPR HHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCC AAPPAQDPAEAISAERSDQRALQVLCCGITPQLVDEAIRRHGWPVRWVDDLNEADVVLSI CCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHH RKGLGHQPTLRRQARESRVPVLVIKSDTLPQVERALERLLARRAGPQDQLSHSESQDGDQ HHCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCH EDALAALEECRLAVEKVVLPYGRPVELLPRSEQVRQMQVDLVTRYRLSSDVFGQAEQQRL HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RVYPP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA