| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023886
Identifier: 124023886
GI number: 124023886
Start: 1950855
End: 1952018
Strand: Direct
Name: 124023886
Synonym: P9303_21931
Alternate gene names: NA
Gene position: 1950855-1952018 (Clockwise)
Preceding gene: 124023885
Following gene: 124023890
Centisome position: 72.72
GC content: 38.57
Gene sequence:
>1164_bases ATGATTAAACCACTTAGTCTAATAATTACAGCGTCTGCTGTTGTTATTAGTCCATTGTCTGCTGTAGCTGAGATTGATCC TGAACTTCATAAGCTGTGTATAGATGCCAAAGATTACAAAGGATGTATCGAGGCAAGAACAGAACCATCGCCTGAGATTG AGTCAAATGAAAATGAAGTTGAAGTATCGGCACCTTCAACCTACAACTATGAAAAAGATTCAGTAAGGCAGCTAAAGATT AGAGGTAAGTATGGAAGGTACTTAACCTTTATAGGTCGAACACCAAACACCTATAGCGGGACTAGCGGTTCATATAGTCC AGGTAGTGGTGGGACCTTAAATTGTTCTACTTACGGTTCCTCTACTTATGCTACAACTAATTGCTACCGCACTGGTTATG TAGCACCTTCTTATACACCAGCCAGACCAGGTGGTACACAACATCAAAGGTTCAGGTATGAACTTGATTGCCAAGATCAA ACATATAATATTAAAGGTGACTTAAAGTCAGCCGGAGGGTTTAAGAAGGGTTGGATGCATGTGAGTAATGATCCTGTCGC TAGTGCTGTAGCTAGAAAATACTGTCCTGTTATTGATACGTTGGCTGTTGCTGGATATGTAAACAAGGGGGATGTTTTTG AGTCAGGATCCATACTATGGAAGGATCGTTGGGGTCCAGAACCAAAAGCATCTATTAGCGAAGAAAAATATTATTTATTC AAAACGTATGTAAAAAATAAACAATACAAGGAGGCGTTAAAACTATCAAATAAATTGGTCATTGATTTTCCTGATGATCC ACGCTCATGGACTCATCTAGGCGTTGCATATTTTATTTTAAAGGATTATTCTGCTGCAAAGGAACAATTAAACAAGGCAA TATTTATCAACCCGCTGTTTGAAGATGCCTACTATAATCGAGGCCTAGTTTATTCAGCCTTAGGTTTATACGATCAAGCA ATCCGTGATTACACTAAAGCTATTCGTATGTACCCAGATAGAATGCACTTTTGGGTGAATAGGTCTACTGCTTATTGGAG AAAAGGAGACAAGCAGAAATCTTGTAGTGATTCTCGTAAGTTAATTCAATTAGGACTCCAGAATCCAGAGTGGCAAAAAT GGTGGCAAAAGTTTGGCAAAAAAGAATGCAAGAAATACAAGTAA
Upstream 100 bases:
>100_bases AAATCAAAGCAACAATTAAACGATATTAAATTGGATGGTATTGATGCTAATTTCAAGTTACAACTACATAAATCAAAGCC AACTCAGGTTCCGGCAAACG
Downstream 100 bases:
>100_bases CTAAAACTACTAAGCACAACCAACGATCAACGTTCTTCTTACCATCTACTAGTTGTGGATTCCGTTCCTACTAGATAGAT CCAAGAAATAGCAAGTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Domain Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Family Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; Peptidase; 72K Mitochondrial Outer Membrane Protein Related Protein; TPR Repeat-Containing Protein Kinase
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MIKPLSLIITASAVVISPLSAVAEIDPELHKLCIDAKDYKGCIEARTEPSPEIESNENEVEVSAPSTYNYEKDSVRQLKI RGKYGRYLTFIGRTPNTYSGTSGSYSPGSGGTLNCSTYGSSTYATTNCYRTGYVAPSYTPARPGGTQHQRFRYELDCQDQ TYNIKGDLKSAGGFKKGWMHVSNDPVASAVARKYCPVIDTLAVAGYVNKGDVFESGSILWKDRWGPEPKASISEEKYYLF KTYVKNKQYKEALKLSNKLVIDFPDDPRSWTHLGVAYFILKDYSAAKEQLNKAIFINPLFEDAYYNRGLVYSALGLYDQA IRDYTKAIRMYPDRMHFWVNRSTAYWRKGDKQKSCSDSRKLIQLGLQNPEWQKWWQKFGKKECKKYK
Sequences:
>Translated_387_residues MIKPLSLIITASAVVISPLSAVAEIDPELHKLCIDAKDYKGCIEARTEPSPEIESNENEVEVSAPSTYNYEKDSVRQLKI RGKYGRYLTFIGRTPNTYSGTSGSYSPGSGGTLNCSTYGSSTYATTNCYRTGYVAPSYTPARPGGTQHQRFRYELDCQDQ TYNIKGDLKSAGGFKKGWMHVSNDPVASAVARKYCPVIDTLAVAGYVNKGDVFESGSILWKDRWGPEPKASISEEKYYLF KTYVKNKQYKEALKLSNKLVIDFPDDPRSWTHLGVAYFILKDYSAAKEQLNKAIFINPLFEDAYYNRGLVYSALGLYDQA IRDYTKAIRMYPDRMHFWVNRSTAYWRKGDKQKSCSDSRKLIQLGLQNPEWQKWWQKFGKKECKKYK >Mature_387_residues MIKPLSLIITASAVVISPLSAVAEIDPELHKLCIDAKDYKGCIEARTEPSPEIESNENEVEVSAPSTYNYEKDSVRQLKI RGKYGRYLTFIGRTPNTYSGTSGSYSPGSGGTLNCSTYGSSTYATTNCYRTGYVAPSYTPARPGGTQHQRFRYELDCQDQ TYNIKGDLKSAGGFKKGWMHVSNDPVASAVARKYCPVIDTLAVAGYVNKGDVFESGSILWKDRWGPEPKASISEEKYYLF KTYVKNKQYKEALKLSNKLVIDFPDDPRSWTHLGVAYFILKDYSAAKEQLNKAIFINPLFEDAYYNRGLVYSALGLYDQA IRDYTKAIRMYPDRMHFWVNRSTAYWRKGDKQKSCSDSRKLIQLGLQNPEWQKWWQKFGKKECKKYK
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44045; Mature: 44045
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKPLSLIITASAVVISPLSAVAEIDPELHKLCIDAKDYKGCIEARTEPSPEIESNENEV CCCCCEEHEEHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEE EVSAPSTYNYEKDSVRQLKIRGKYGRYLTFIGRTPNTYSGTSGSYSPGSGGTLNCSTYGS EEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC STYATTNCYRTGYVAPSYTPARPGGTQHQRFRYELDCQDQTYNIKGDLKSAGGFKKGWMH CCEEECCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEE VSNDPVASAVARKYCPVIDTLAVAGYVNKGDVFESGSILWKDRWGPEPKASISEEKYYLF ECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCEEEH KTYVKNKQYKEALKLSNKLVIDFPDDPRSWTHLGVAYFILKDYSAAKEQLNKAIFINPLF HHHHCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHH EDAYYNRGLVYSALGLYDQAIRDYTKAIRMYPDRMHFWVNRSTAYWRKGDKQKSCSDSRK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCHHHHHH LIQLGLQNPEWQKWWQKFGKKECKKYK HHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKPLSLIITASAVVISPLSAVAEIDPELHKLCIDAKDYKGCIEARTEPSPEIESNENEV CCCCCEEHEEHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEE EVSAPSTYNYEKDSVRQLKIRGKYGRYLTFIGRTPNTYSGTSGSYSPGSGGTLNCSTYGS EEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC STYATTNCYRTGYVAPSYTPARPGGTQHQRFRYELDCQDQTYNIKGDLKSAGGFKKGWMH CCEEECCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCEE VSNDPVASAVARKYCPVIDTLAVAGYVNKGDVFESGSILWKDRWGPEPKASISEEKYYLF ECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCEECCCCEEEECCCCCCCCCCCCCCCEEEH KTYVKNKQYKEALKLSNKLVIDFPDDPRSWTHLGVAYFILKDYSAAKEQLNKAIFINPLF HHHHCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHH EDAYYNRGLVYSALGLYDQAIRDYTKAIRMYPDRMHFWVNRSTAYWRKGDKQKSCSDSRK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCHHHHHH LIQLGLQNPEWQKWWQKFGKKECKKYK HHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA