| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023885
Identifier: 124023885
GI number: 124023885
Start: 1949044
End: 1949796
Strand: Direct
Name: 124023885
Synonym: P9303_21921
Alternate gene names: NA
Gene position: 1949044-1949796 (Clockwise)
Preceding gene: 124023884
Following gene: 124023886
Centisome position: 72.65
GC content: 46.22
Gene sequence:
>753_bases GTGACCTCATCTGACATAGCTTCATATGATCAGGATCTGGACAGCGCGATCGACGGTCTTCAGCTCTCCAGGGCGTGCAC CAACAAGCTCTCGCCTAGCCAGGTCGAGAACATGAAGACAAACGTTGTGCTTGCGAATGAAGCAATAGCAACTGCAGGCA ATGCCGTAAGGGCAAGCGCAGGTGCGCTATATGAAATCAAGAAGGATGTAAAGAACAAGAACTGGACGGCCTTGACCGAG AGCGGAGCATTGCAAATGTCCGGCAGGATGGCCCGTGATCTAGTTAAAGCTTATGAGAGTTGGATAAGAGATAGTGATGT GCCTGACGAAGCCTTAGCGAGAGTCTCAGCAAGAGTACTGGCGAGAATAGGCTCGGTAGATGCAGGCAAGAGAACGCATG CGATTAACAAGATAAAAAGAGGCGAAGGGTACACAGAGCAGGATCTGACGAAGATCATCGGCAATACCAAATCACCAGTG CGTCGTCAAATCGATGACCTTGTTGCACAAGCAGAGAAGAAGATCAAAGCTAGTACTAATGAAGACAAGATCAATCAGTT TGAAAAGTTGATAATGGAGAACGTCAACTTAGAAGGAAAACTAGAAAAGCAGAAAGAATTGAACAATGAGTTGCAGCAAC AAAATAAGAAGCTGGACAAAAACAACAAGGAGCTTATAAAGCTGCTCCACCAAGCTGCTACTGAAGGTGTATCACCAGCA TCAGTAAATGAAGCAGCTGCAGCATTAGTCTAA
Upstream 100 bases:
>100_bases TATAGAAAGATAGCGCGCTCCTTCCTGGATAGTACGCTCGTATTCCTTTGGACATATCGTCCATAGCACCTATATTCAGC CCATCCATCCCTGGGCTCCC
Downstream 100 bases:
>100_bases ATAGCTTTCAAGTTTTTACTACATTCAGAAATCTCATTACATTTAGTTCTCACTGCATCCCTAACAAAACTAGCGGTATC TTTATAACCTGCTTTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTSSDIASYDQDLDSAIDGLQLSRACTNKLSPSQVENMKTNVVLANEAIATAGNAVRASAGALYEIKKDVKNKNWTALTE SGALQMSGRMARDLVKAYESWIRDSDVPDEALARVSARVLARIGSVDAGKRTHAINKIKRGEGYTEQDLTKIIGNTKSPV RRQIDDLVAQAEKKIKASTNEDKINQFEKLIMENVNLEGKLEKQKELNNELQQQNKKLDKNNKELIKLLHQAATEGVSPA SVNEAAAALV
Sequences:
>Translated_250_residues MTSSDIASYDQDLDSAIDGLQLSRACTNKLSPSQVENMKTNVVLANEAIATAGNAVRASAGALYEIKKDVKNKNWTALTE SGALQMSGRMARDLVKAYESWIRDSDVPDEALARVSARVLARIGSVDAGKRTHAINKIKRGEGYTEQDLTKIIGNTKSPV RRQIDDLVAQAEKKIKASTNEDKINQFEKLIMENVNLEGKLEKQKELNNELQQQNKKLDKNNKELIKLLHQAATEGVSPA SVNEAAAALV >Mature_249_residues TSSDIASYDQDLDSAIDGLQLSRACTNKLSPSQVENMKTNVVLANEAIATAGNAVRASAGALYEIKKDVKNKNWTALTES GALQMSGRMARDLVKAYESWIRDSDVPDEALARVSARVLARIGSVDAGKRTHAINKIKRGEGYTEQDLTKIIGNTKSPVR RQIDDLVAQAEKKIKASTNEDKINQFEKLIMENVNLEGKLEKQKELNNELQQQNKKLDKNNKELIKLLHQAATEGVSPAS VNEAAAALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27374; Mature: 27243
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSDIASYDQDLDSAIDGLQLSRACTNKLSPSQVENMKTNVVLANEAIATAGNAVRASA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECHHHHHCCCHHHHHH GALYEIKKDVKNKNWTALTESGALQMSGRMARDLVKAYESWIRDSDVPDEALARVSARVL HHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ARIGSVDAGKRTHAINKIKRGEGYTEQDLTKIIGNTKSPVRRQIDDLVAQAEKKIKASTN HHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC EDKINQFEKLIMENVNLEGKLEKQKELNNELQQQNKKLDKNNKELIKLLHQAATEGVSPA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC SVNEAAAALV HHHHHHHHCC >Mature Secondary Structure TSSDIASYDQDLDSAIDGLQLSRACTNKLSPSQVENMKTNVVLANEAIATAGNAVRASA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEECHHHHHCCCHHHHHH GALYEIKKDVKNKNWTALTESGALQMSGRMARDLVKAYESWIRDSDVPDEALARVSARVL HHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ARIGSVDAGKRTHAINKIKRGEGYTEQDLTKIIGNTKSPVRRQIDDLVAQAEKKIKASTN HHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC EDKINQFEKLIMENVNLEGKLEKQKELNNELQQQNKKLDKNNKELIKLLHQAATEGVSPA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC SVNEAAAALV HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA