| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023867
Identifier: 124023867
GI number: 124023867
Start: 1931062
End: 1932102
Strand: Reverse
Name: 124023867
Synonym: P9303_21741
Alternate gene names: NA
Gene position: 1932102-1931062 (Counterclockwise)
Preceding gene: 124023875
Following gene: 124023866
Centisome position: 72.02
GC content: 57.35
Gene sequence:
>1041_bases GTGAGTTCGTCCGTTGCTCTTGATCCTCCTGTTATTGAGCTGGATCTGCCCGATCCGGAGCAGGACGACATCAGCACCAT GGAGTTTCTTGCTCGACTCGAGCAAGCCTGGGCCTTGTGCGATCGCTTTGATTTGCAAACTGAGATTTGGCGGGGGCGAA TCCTTAGGGCAGTGCGGGATCGTGAGAAGCGGGGTGGTGAGGGGCGTGGAGCTGGCTTTTTGCAGTGGTTGCGTGAACGG GAGATCAGTAAGACCCGTGCTTATGCCCTGATTCAGCTGGCTGATTCGGCTGAGAACTTGCTGGCAGAAGGAATGCTGGA GGAGAGCAGCGTGAATCAATTCTCTAAAAGGGCCTTCATGGAAACGACGCAGGCTGTTCCAGAGGTGCAGATGATGATTT CCGAGGCAGCGAATGAAGGTCAAGAGATCACTCGCAAGCAGGTTCGCCGACTGACGGATGAGTTCACGTCTGCCACAAGC CCCCTGTTGCCGGAGGAGATCCGCCAGCGCACGCAGGAGAATCTTTTGCCTCCCAAGGTTGTGGCTCCTCTGGTCAGGGA GCTGGCAAAACTGCCGGAGCTTCAGCAGGAAGACCTCAGGCGAGCTTTGCGGGAGGAACCTGAACTGGATTGCATTAAGG ATGTAACCAGCACAGCACGCTGGATCAGTAAGACCACAGAGGCCAGCGAGGCGGTGAGGGCTTTCCAGCAAGGTGAACTC AACCTGGAGAAGGCCATGCATGAGGCTCAGCGTCTCGATGCCTTGGGTTTGCTTGCAGATGCTGTCTCTCAAGCTCAGTC TTTAGAAGCCTCCGTTCTGAAGCTGCATACGGCCTGGCGACGATTGGGGGGGTTACAGGAACGCCTTTGGGTGGAAAGTG GCAGCAGCACCCCTTATCTCCGCGATGTTTTGGGTGCTTTGCAGAGCCTTAGCGGGGCAACCTTGAGGGTGTCGCTTGGG GAGTTGGCGGGAGGGAAACGGGTTCGCTTGCAGCTCGTGGAGGAGGCTCCTGACCAGCTAGAGCCGCCGCCGCTGCCTTG A
Upstream 100 bases:
>100_bases ACTATCGCCGTGAGTGTGTGAGTTGACTCATGCGTCACAGAATGTCGCCCCTTGGGGTGTAGGCCATGGCAGCATCCAGC CTTAAGTCAGGTGTGTTTTG
Downstream 100 bases:
>100_bases GTTCGAGATCGTGCCATCAGGCTTAGCGCTCGTTATCTTGAGGGCGCTATTGGTGGTGTGAAGTGGATCCACTGATCGAG GCCCTGCACCATCACTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MSSSVALDPPVIELDLPDPEQDDISTMEFLARLEQAWALCDRFDLQTEIWRGRILRAVRDREKRGGEGRGAGFLQWLRER EISKTRAYALIQLADSAENLLAEGMLEESSVNQFSKRAFMETTQAVPEVQMMISEAANEGQEITRKQVRRLTDEFTSATS PLLPEEIRQRTQENLLPPKVVAPLVRELAKLPELQQEDLRRALREEPELDCIKDVTSTARWISKTTEASEAVRAFQQGEL NLEKAMHEAQRLDALGLLADAVSQAQSLEASVLKLHTAWRRLGGLQERLWVESGSSTPYLRDVLGALQSLSGATLRVSLG ELAGGKRVRLQLVEEAPDQLEPPPLP
Sequences:
>Translated_346_residues MSSSVALDPPVIELDLPDPEQDDISTMEFLARLEQAWALCDRFDLQTEIWRGRILRAVRDREKRGGEGRGAGFLQWLRER EISKTRAYALIQLADSAENLLAEGMLEESSVNQFSKRAFMETTQAVPEVQMMISEAANEGQEITRKQVRRLTDEFTSATS PLLPEEIRQRTQENLLPPKVVAPLVRELAKLPELQQEDLRRALREEPELDCIKDVTSTARWISKTTEASEAVRAFQQGEL NLEKAMHEAQRLDALGLLADAVSQAQSLEASVLKLHTAWRRLGGLQERLWVESGSSTPYLRDVLGALQSLSGATLRVSLG ELAGGKRVRLQLVEEAPDQLEPPPLP >Mature_345_residues SSSVALDPPVIELDLPDPEQDDISTMEFLARLEQAWALCDRFDLQTEIWRGRILRAVRDREKRGGEGRGAGFLQWLRERE ISKTRAYALIQLADSAENLLAEGMLEESSVNQFSKRAFMETTQAVPEVQMMISEAANEGQEITRKQVRRLTDEFTSATSP LLPEEIRQRTQENLLPPKVVAPLVRELAKLPELQQEDLRRALREEPELDCIKDVTSTARWISKTTEASEAVRAFQQGELN LEKAMHEAQRLDALGLLADAVSQAQSLEASVLKLHTAWRRLGGLQERLWVESGSSTPYLRDVLGALQSLSGATLRVSLGE LAGGKRVRLQLVEEAPDQLEPPPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38796; Mature: 38664
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSVALDPPVIELDLPDPEQDDISTMEFLARLEQAWALCDRFDLQTEIWRGRILRAVRD CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKRGGEGRGAGFLQWLREREISKTRAYALIQLADSAENLLAEGMLEESSVNQFSKRAFM HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETTQAVPEVQMMISEAANEGQEITRKQVRRLTDEFTSATSPLLPEEIRQRTQENLLPPKV HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHH VAPLVRELAKLPELQQEDLRRALREEPELDCIKDVTSTARWISKTTEASEAVRAFQQGEL HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NLEKAMHEAQRLDALGLLADAVSQAQSLEASVLKLHTAWRRLGGLQERLWVESGSSTPYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH RDVLGALQSLSGATLRVSLGELAGGKRVRLQLVEEAPDQLEPPPLP HHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHCCHHCCCCCCC >Mature Secondary Structure SSSVALDPPVIELDLPDPEQDDISTMEFLARLEQAWALCDRFDLQTEIWRGRILRAVRD CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REKRGGEGRGAGFLQWLREREISKTRAYALIQLADSAENLLAEGMLEESSVNQFSKRAFM HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETTQAVPEVQMMISEAANEGQEITRKQVRRLTDEFTSATSPLLPEEIRQRTQENLLPPKV HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHH VAPLVRELAKLPELQQEDLRRALREEPELDCIKDVTSTARWISKTTEASEAVRAFQQGEL HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NLEKAMHEAQRLDALGLLADAVSQAQSLEASVLKLHTAWRRLGGLQERLWVESGSSTPYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHH RDVLGALQSLSGATLRVSLGELAGGKRVRLQLVEEAPDQLEPPPLP HHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA