| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023782
Identifier: 124023782
GI number: 124023782
Start: 1842896
End: 1843408
Strand: Direct
Name: 124023782
Synonym: P9303_20891
Alternate gene names: NA
Gene position: 1842896-1843408 (Clockwise)
Preceding gene: 124023781
Following gene: 124023783
Centisome position: 68.7
GC content: 42.69
Gene sequence:
>513_bases ATGGGTCTATCAACCACCCACAAAGAGCTTGATGGTTTTACTCTGACAGAATTAATGATCACTATTGTCATTGTAGGGAT CCTGAGCGCTGTTGCATTGCCAAATTACTTTAATCAGGTGCAGAGAGCCAAACAAAGTGAGGCTGTAGCGACTCTGGCTC AGATACAAAACACCCTGGCAGCCTATATCGATGAGTTCAACCTTGTGCCTACTGGATGGAAAGACCTCAATGAAATTGCT GCAATCATGACAACTGAAGGGCCTGCAAATCTTACAACATTCAATCAGATTATTTTGCCAGGTGGCAACTATGCACTGAG CCGAACTGATAATGGCAAGAATGAAAACTATTTTGAATTCACAGCAAGTTCCACGAACACAAATAGCGAAACTGCCAAGT TTAATGTGATGGCTTGCATTGATCTTGAAGGAGGCGCTAGTGACATCAAAAGAGGAGTAATCGATAGCAAAAAGAAGGGT GCCGTTAGCAATGCAGATCTTGTATGCAGGTAA
Upstream 100 bases:
>100_bases TACCAAGGATAACTTCACAGGATTCTCAGGAAAGTCTCAGTCACTGAAGAATCAATTCTATTATCATTTTCTATATAGAT ACTAACAAGTCTTCTACTCC
Downstream 100 bases:
>100_bases AACTAATGTCTAAAATTCATCGGTATAAACTTCATTACCTACAAAGCCGATTAAAACGGAACAAACCACCAAAAGGAGAA GAAGGCTTAGCGCTGTTATT
Product: pilin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MGLSTTHKELDGFTLTELMITIVIVGILSAVALPNYFNQVQRAKQSEAVATLAQIQNTLAAYIDEFNLVPTGWKDLNEIA AIMTTEGPANLTTFNQIILPGGNYALSRTDNGKNENYFEFTASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKKG AVSNADLVCR
Sequences:
>Translated_170_residues MGLSTTHKELDGFTLTELMITIVIVGILSAVALPNYFNQVQRAKQSEAVATLAQIQNTLAAYIDEFNLVPTGWKDLNEIA AIMTTEGPANLTTFNQIILPGGNYALSRTDNGKNENYFEFTASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKKG AVSNADLVCR >Mature_169_residues GLSTTHKELDGFTLTELMITIVIVGILSAVALPNYFNQVQRAKQSEAVATLAQIQNTLAAYIDEFNLVPTGWKDLNEIAA IMTTEGPANLTTFNQIILPGGNYALSRTDNGKNENYFEFTASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKKGA VSNADLVCR
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18328; Mature: 18197
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSTTHKELDGFTLTELMITIVIVGILSAVALPNYFNQVQRAKQSEAVATLAQIQNTLA CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH AYIDEFNLVPTGWKDLNEIAAIMTTEGPANLTTFNQIILPGGNYALSRTDNGKNENYFEF HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEE TASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKKGAVSNADLVCR EECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEC >Mature Secondary Structure GLSTTHKELDGFTLTELMITIVIVGILSAVALPNYFNQVQRAKQSEAVATLAQIQNTLA CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH AYIDEFNLVPTGWKDLNEIAAIMTTEGPANLTTFNQIILPGGNYALSRTDNGKNENYFEF HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEE TASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKKGAVSNADLVCR EECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA