Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124023782

Identifier: 124023782

GI number: 124023782

Start: 1842896

End: 1843408

Strand: Direct

Name: 124023782

Synonym: P9303_20891

Alternate gene names: NA

Gene position: 1842896-1843408 (Clockwise)

Preceding gene: 124023781

Following gene: 124023783

Centisome position: 68.7

GC content: 42.69

Gene sequence:

>513_bases
ATGGGTCTATCAACCACCCACAAAGAGCTTGATGGTTTTACTCTGACAGAATTAATGATCACTATTGTCATTGTAGGGAT
CCTGAGCGCTGTTGCATTGCCAAATTACTTTAATCAGGTGCAGAGAGCCAAACAAAGTGAGGCTGTAGCGACTCTGGCTC
AGATACAAAACACCCTGGCAGCCTATATCGATGAGTTCAACCTTGTGCCTACTGGATGGAAAGACCTCAATGAAATTGCT
GCAATCATGACAACTGAAGGGCCTGCAAATCTTACAACATTCAATCAGATTATTTTGCCAGGTGGCAACTATGCACTGAG
CCGAACTGATAATGGCAAGAATGAAAACTATTTTGAATTCACAGCAAGTTCCACGAACACAAATAGCGAAACTGCCAAGT
TTAATGTGATGGCTTGCATTGATCTTGAAGGAGGCGCTAGTGACATCAAAAGAGGAGTAATCGATAGCAAAAAGAAGGGT
GCCGTTAGCAATGCAGATCTTGTATGCAGGTAA

Upstream 100 bases:

>100_bases
TACCAAGGATAACTTCACAGGATTCTCAGGAAAGTCTCAGTCACTGAAGAATCAATTCTATTATCATTTTCTATATAGAT
ACTAACAAGTCTTCTACTCC

Downstream 100 bases:

>100_bases
AACTAATGTCTAAAATTCATCGGTATAAACTTCATTACCTACAAAGCCGATTAAAACGGAACAAACCACCAAAAGGAGAA
GAAGGCTTAGCGCTGTTATT

Product: pilin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MGLSTTHKELDGFTLTELMITIVIVGILSAVALPNYFNQVQRAKQSEAVATLAQIQNTLAAYIDEFNLVPTGWKDLNEIA
AIMTTEGPANLTTFNQIILPGGNYALSRTDNGKNENYFEFTASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKKG
AVSNADLVCR

Sequences:

>Translated_170_residues
MGLSTTHKELDGFTLTELMITIVIVGILSAVALPNYFNQVQRAKQSEAVATLAQIQNTLAAYIDEFNLVPTGWKDLNEIA
AIMTTEGPANLTTFNQIILPGGNYALSRTDNGKNENYFEFTASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKKG
AVSNADLVCR
>Mature_169_residues
GLSTTHKELDGFTLTELMITIVIVGILSAVALPNYFNQVQRAKQSEAVATLAQIQNTLAAYIDEFNLVPTGWKDLNEIAA
IMTTEGPANLTTFNQIILPGGNYALSRTDNGKNENYFEFTASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKKGA
VSNADLVCR

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18328; Mature: 18197

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSTTHKELDGFTLTELMITIVIVGILSAVALPNYFNQVQRAKQSEAVATLAQIQNTLA
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AYIDEFNLVPTGWKDLNEIAAIMTTEGPANLTTFNQIILPGGNYALSRTDNGKNENYFEF
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEE
TASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKKGAVSNADLVCR
EECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEC
>Mature Secondary Structure 
GLSTTHKELDGFTLTELMITIVIVGILSAVALPNYFNQVQRAKQSEAVATLAQIQNTLA
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AYIDEFNLVPTGWKDLNEIAAIMTTEGPANLTTFNQIILPGGNYALSRTDNGKNENYFEF
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEE
TASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKKGAVSNADLVCR
EECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA