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The map label for this gene is ppdD [C]

Identifier: 124023781

GI number: 124023781

Start: 1841663

End: 1842142

Strand: Direct

Name: ppdD [C]

Synonym: P9303_20881

Alternate gene names: 124023781

Gene position: 1841663-1842142 (Clockwise)

Preceding gene: 124023774

Following gene: 124023782

Centisome position: 68.65

GC content: 46.88

Gene sequence:

>480_bases
TTGAAATTGCATATCACCATGAGCATCCTCAACCAACAGCTAAAGCTTGCGCTGTTGAGACGCCAGAAGGGAGCTAGCGC
TTTACAGCAAGGCTTCACCCTGGTGGAGCTGATGATCGTGATTGTGATCGTTGGCATCCTTAGTTCAGTTGCGCTACCTA
ACTTCCTAAACCAAACCAAAAAAGCGGCCGCCACAGAAGCCAAACAACAAGTGAGCAGCATTTTCAAGCAAACTCATGCC
TTTGTACTTGAAAACGGAAGCCTTGGCACTGTTGATGGAGATTGCAGTGATTACGCTGGAACACTAACGACAATTAAGGA
AGGTGCAGGCTTTAGTTACGTGTGCAGTGGCACTCAAGCTGCATTCGTTGTAACTGCCACTGGTGACACAAATGATAACA
ATACAAAGGGAGTCAGCGTTACACTTACAGGTGACAGCGTCAAAGGAACAGTAGCCAGTATTGCAACCACCGGAACATAA

Upstream 100 bases:

>100_bases
TAACGAGCCTCTAAGCCGACTCAAAGAGAACTCTCAGAGAAGCCTTAGACGATCCTTCACCACAAATTCGTCATAGCAAG
GCAATATGATGGGGCCAATA

Downstream 100 bases:

>100_bases
TCAGTAGACATAATTACCGAAGATAAGCATCAGAGGAAATACTTAAACAAGCTCAGAAAGCTTACATCGAAACCGGCATA
GCCCCTGAGACCAAAGATAT

Product: pilin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKLHITMSILNQQLKLALLRRQKGASALQQGFTLVELMIVIVIVGILSSVALPNFLNQTKKAAATEAKQQVSSIFKQTHA
FVLENGSLGTVDGDCSDYAGTLTTIKEGAGFSYVCSGTQAAFVVTATGDTNDNNTKGVSVTLTGDSVKGTVASIATTGT

Sequences:

>Translated_159_residues
MKLHITMSILNQQLKLALLRRQKGASALQQGFTLVELMIVIVIVGILSSVALPNFLNQTKKAAATEAKQQVSSIFKQTHA
FVLENGSLGTVDGDCSDYAGTLTTIKEGAGFSYVCSGTQAAFVVTATGDTNDNNTKGVSVTLTGDSVKGTVASIATTGT
>Mature_159_residues
MKLHITMSILNQQLKLALLRRQKGASALQQGFTLVELMIVIVIVGILSSVALPNFLNQTKKAAATEAKQQVSSIFKQTHA
FVLENGSLGTVDGDCSDYAGTLTTIKEGAGFSYVCSGTQAAFVVTATGDTNDNNTKGVSVTLTGDSVKGTVASIATTGT

Specific function: Not Yet Known. [C]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786297, Length=115, Percent_Identity=36.5217391304348, Blast_Score=60, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16543; Mature: 16543

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHITMSILNQQLKLALLRRQKGASALQQGFTLVELMIVIVIVGILSSVALPNFLNQTK
CEEEEEHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KAAATEAKQQVSSIFKQTHAFVLENGSLGTVDGDCSDYAGTLTTIKEGAGFSYVCSGTQA
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHCCHHHHHHCCCCCEEEECCCCE
AFVVTATGDTNDNNTKGVSVTLTGDSVKGTVASIATTGT
EEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHEEECCC
>Mature Secondary Structure
MKLHITMSILNQQLKLALLRRQKGASALQQGFTLVELMIVIVIVGILSSVALPNFLNQTK
CEEEEEHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KAAATEAKQQVSSIFKQTHAFVLENGSLGTVDGDCSDYAGTLTTIKEGAGFSYVCSGTQA
HHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHCCHHHHHHCCCCCEEEECCCCE
AFVVTATGDTNDNNTKGVSVTLTGDSVKGTVASIATTGT
EEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA