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The map label for this gene is sun [H]

Identifier: 124023762

GI number: 124023762

Start: 1820678

End: 1822030

Strand: Reverse

Name: sun [H]

Synonym: P9303_20681

Alternate gene names: 124023762

Gene position: 1822030-1820678 (Counterclockwise)

Preceding gene: 124023763

Following gene: 124023758

Centisome position: 67.92

GC content: 57.95

Gene sequence:

>1353_bases
ATGTTGTCTTCTTCCGTTGCTGCCGCTGATGGATCTGTACCTGTACCGGGACTGCTGCCGCGGCGGGTGGCATGGGAGCT
GTTACAGGCAGTGGCGGCAGGGGCCTATGCAGATGTCGCTCTCGAACGAGCTCTTCGTCAGAACCCCATGAGCGGTGCCG
ACCGTGGCCTGGTGATGGAATTGGCTTATGGCGCAATCCGTCAGCGGCAATGGCTCGATGCTTGGTTGGATCGTCTTGGC
AAGGTGCCTGCCTGCAAACAGCCACCAGTGCTGCGCTGGTTGCTGCATTTGGGGCTCTATCAGATTCTGCGTATGCAGCG
GATTCCAGCTGCAGCGGCAGTGAACACCAGCGTTGAACTTGCTAAGACCGGCAAGCTTGCCCGATTAGCTCCGGTGGTGA
ATGGCATTTTGCGGGCGGCATTGCGTGCACGCGATGCCGGTATGGTGCTCCTCGAGCCGGAGGACTCTGCCGCTCGGTTG
GCTCAAGCGGAATCTCTACCTTTGTGGTTGGTGGAGCAATTACTTGTTTGGCGAGGCGAGGTGGGAGCTGAGCTGTTTGC
TCGTGCCAGCAACCAGGTGCCAACTCTTGATCTGCGGATCAATCGACGTCGTACAAGCCGTGAGAACGTAAGGCTGGCGC
TTGAGGCTATTGGAGTGGAGAGCACTCCGATCGAGAGCTGCCCTGATGGTTTGATGGTGACTGGTAGTGCTGGTGACCTA
AGCCAGTGGCCTGGCTATCAGCAAGGACATTGGTGTGTGCAGGATCGCTCTGCACAGTTGGTCGCACCGCTGTTGGGGCC
ACAGCCTGGGGATCGGATTCTTGATGCCTGCGCAGCACCAGGGGGTAAGGCCACTCATCTTGTTGAGCTGATGGGTGGTT
CGGGAGAGGTGTGGGCTGTGGATCGTTCCGCTGGCCGACTCAAGCGCTTGGCGGAGAATGCTGCTCGCTTGGGGGGTGAC
TGCCTCCATGCTCTAGTCGCAGATGCCACGAATCTGTTGGCGGTGAAGCCCAGCTGGCGAGGATCCTTCCAGCGCATTCT
TGTGGATGCACCATGTTCTGGTTTAGGTACTTTGGCCCGTCATGCGGACGCACGTTGGCGAGTCACTCCGTTGCAGGTTG
AGGGGCTGGTGATCTTGCAGTCCAAGCTGCTTGAAGGCCTTCTGCCTCTGCTTAGCTCTGGAGGCCGATTGGTTTACGCC
ACTTGCACCATCCATCCGGCCGAGAACTTTGATCAGATCAAGGCCTTCCTTGGTCGGCATCCTGAATTGAGCTTGTCTCA
GGAACAGCAACTATGGCCTGATCCTGAGCATGGTGGTGATGGTTTTTATTCAGCCGTGTTGGATCTCAGCTGA

Upstream 100 bases:

>100_bases
ATCTTTGGCGGCCGCAGTTGAGTGATGAGGGCCTTTTGATGGGAACGGCTCAGGAAGGCGTTAGCTCTGGAAGGTTCATC
TCAGCCCAGGACAACCATTG

Downstream 100 bases:

>100_bases
GCCTGATCAGGGCATAGGCATTGGCTCGAAGTTTTCATTGAGAGGTGGTCCCCCTGGCGGTGCGATGTATCTGGGCGGAG
GGCCCTGGGTTTGATCTTGG

Product: Sun protein (Fmu protein)

Products: NA

Alternate protein names: rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MLSSSVAAADGSVPVPGLLPRRVAWELLQAVAAGAYADVALERALRQNPMSGADRGLVMELAYGAIRQRQWLDAWLDRLG
KVPACKQPPVLRWLLHLGLYQILRMQRIPAAAAVNTSVELAKTGKLARLAPVVNGILRAALRARDAGMVLLEPEDSAARL
AQAESLPLWLVEQLLVWRGEVGAELFARASNQVPTLDLRINRRRTSRENVRLALEAIGVESTPIESCPDGLMVTGSAGDL
SQWPGYQQGHWCVQDRSAQLVAPLLGPQPGDRILDACAAPGGKATHLVELMGGSGEVWAVDRSAGRLKRLAENAARLGGD
CLHALVADATNLLAVKPSWRGSFQRILVDAPCSGLGTLARHADARWRVTPLQVEGLVILQSKLLEGLLPLLSSGGRLVYA
TCTIHPAENFDQIKAFLGRHPELSLSQEQQLWPDPEHGGDGFYSAVLDLS

Sequences:

>Translated_450_residues
MLSSSVAAADGSVPVPGLLPRRVAWELLQAVAAGAYADVALERALRQNPMSGADRGLVMELAYGAIRQRQWLDAWLDRLG
KVPACKQPPVLRWLLHLGLYQILRMQRIPAAAAVNTSVELAKTGKLARLAPVVNGILRAALRARDAGMVLLEPEDSAARL
AQAESLPLWLVEQLLVWRGEVGAELFARASNQVPTLDLRINRRRTSRENVRLALEAIGVESTPIESCPDGLMVTGSAGDL
SQWPGYQQGHWCVQDRSAQLVAPLLGPQPGDRILDACAAPGGKATHLVELMGGSGEVWAVDRSAGRLKRLAENAARLGGD
CLHALVADATNLLAVKPSWRGSFQRILVDAPCSGLGTLARHADARWRVTPLQVEGLVILQSKLLEGLLPLLSSGGRLVYA
TCTIHPAENFDQIKAFLGRHPELSLSQEQQLWPDPEHGGDGFYSAVLDLS
>Mature_450_residues
MLSSSVAAADGSVPVPGLLPRRVAWELLQAVAAGAYADVALERALRQNPMSGADRGLVMELAYGAIRQRQWLDAWLDRLG
KVPACKQPPVLRWLLHLGLYQILRMQRIPAAAAVNTSVELAKTGKLARLAPVVNGILRAALRARDAGMVLLEPEDSAARL
AQAESLPLWLVEQLLVWRGEVGAELFARASNQVPTLDLRINRRRTSRENVRLALEAIGVESTPIESCPDGLMVTGSAGDL
SQWPGYQQGHWCVQDRSAQLVAPLLGPQPGDRILDACAAPGGKATHLVELMGGSGEVWAVDRSAGRLKRLAENAARLGGD
CLHALVADATNLLAVKPSWRGSFQRILVDAPCSGLGTLARHADARWRVTPLQVEGLVILQSKLLEGLLPLLSSGGRLVYA
TCTIHPAENFDQIKAFLGRHPELSLSQEQQLWPDPEHGGDGFYSAVLDLS

Specific function: Unknown

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI32698918, Length=205, Percent_Identity=38.0487804878049, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI76150625, Length=287, Percent_Identity=31.0104529616725, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI76150623, Length=287, Percent_Identity=31.0104529616725, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI8922322, Length=195, Percent_Identity=36.9230769230769, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI23199998, Length=195, Percent_Identity=36.9230769230769, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI270288818, Length=195, Percent_Identity=36.9230769230769, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI270288816, Length=195, Percent_Identity=36.9230769230769, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI39995082, Length=185, Percent_Identity=31.3513513513514, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI301336155, Length=185, Percent_Identity=31.3513513513514, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI2367212, Length=408, Percent_Identity=36.2745098039216, Blast_Score=204, Evalue=8e-54,
Organism=Escherichia coli, GI87081985, Length=218, Percent_Identity=31.1926605504587, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17536757, Length=297, Percent_Identity=30.6397306397306, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71998419, Length=169, Percent_Identity=34.9112426035503, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI115534021, Length=175, Percent_Identity=32.5714285714286, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI25143471, Length=213, Percent_Identity=28.6384976525822, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324268, Length=264, Percent_Identity=31.8181818181818, Blast_Score=110, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6319447, Length=164, Percent_Identity=34.1463414634146, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI22024126, Length=285, Percent_Identity=30.8771929824561, Blast_Score=118, Evalue=9e-27,
Organism=Drosophila melanogaster, GI24668781, Length=215, Percent_Identity=34.8837209302326, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21356513, Length=208, Percent_Identity=35.0961538461538, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21355201, Length=206, Percent_Identity=31.5533980582524, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI21356579, Length=214, Percent_Identity=27.5700934579439, Blast_Score=83, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 48497; Mature: 48497

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS01153 NOL1_NOP2_SUN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSSVAAADGSVPVPGLLPRRVAWELLQAVAAGAYADVALERALRQNPMSGADRGLVME
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHH
LAYGAIRQRQWLDAWLDRLGKVPACKQPPVLRWLLHLGLYQILRMQRIPAAAAVNTSVEL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHH
AKTGKLARLAPVVNGILRAALRARDAGMVLLEPEDSAARLAQAESLPLWLVEQLLVWRGE
HHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCC
VGAELFARASNQVPTLDLRINRRRTSRENVRLALEAIGVESTPIESCPDGLMVTGSAGDL
HHHHHHHHCCCCCCEEEEEECCCCCCHHHHEEEHHHHCCCCCCCCCCCCCEEEECCCCCH
SQWPGYQQGHWCVQDRSAQLVAPLLGPQPGDRILDACAAPGGKATHLVELMGGSGEVWAV
HHCCCCCCCCEEECCCCCCEEHHHCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEE
DRSAGRLKRLAENAARLGGDCLHALVADATNLLAVKPSWRGSFQRILVDAPCSGLGTLAR
ECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHH
HADARWRVTPLQVEGLVILQSKLLEGLLPLLSSGGRLVYATCTIHPAENFDQIKAFLGRH
HCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHCCC
PELSLSQEQQLWPDPEHGGDGFYSAVLDLS
CCCCCCCHHCCCCCCCCCCCHHHHHEEECC
>Mature Secondary Structure
MLSSSVAAADGSVPVPGLLPRRVAWELLQAVAAGAYADVALERALRQNPMSGADRGLVME
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHHH
LAYGAIRQRQWLDAWLDRLGKVPACKQPPVLRWLLHLGLYQILRMQRIPAAAAVNTSVEL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHH
AKTGKLARLAPVVNGILRAALRARDAGMVLLEPEDSAARLAQAESLPLWLVEQLLVWRGE
HHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCC
VGAELFARASNQVPTLDLRINRRRTSRENVRLALEAIGVESTPIESCPDGLMVTGSAGDL
HHHHHHHHCCCCCCEEEEEECCCCCCHHHHEEEHHHHCCCCCCCCCCCCCEEEECCCCCH
SQWPGYQQGHWCVQDRSAQLVAPLLGPQPGDRILDACAAPGGKATHLVELMGGSGEVWAV
HHCCCCCCCCEEECCCCCCEEHHHCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCEEEE
DRSAGRLKRLAENAARLGGDCLHALVADATNLLAVKPSWRGSFQRILVDAPCSGLGTLAR
ECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHH
HADARWRVTPLQVEGLVILQSKLLEGLLPLLSSGGRLVYATCTIHPAENFDQIKAFLGRH
HCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHCCC
PELSLSQEQQLWPDPEHGGDGFYSAVLDLS
CCCCCCCHHCCCCCCCCCCCHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]