Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is ydjZ [C]

Identifier: 124023749

GI number: 124023749

Start: 1809635

End: 1810321

Strand: Direct

Name: ydjZ [C]

Synonym: P9303_20551

Alternate gene names: 124023749

Gene position: 1809635-1810321 (Clockwise)

Preceding gene: 124023746

Following gene: 124023752

Centisome position: 67.46

GC content: 36.1

Gene sequence:

>687_bases
ATGGTAGCCCTAATGATTTATATCGCTCAATTTCTAGATGTGTCAACGATAGGAAGTTGGCTAAAAGGTATCGATGGCCG
CGTTGAATCGATAGGGCTATGGGCAATAAGCATTATTTTTGCCCTACGATCAATAAGTATAATAATCCCAATACTTCCTG
GCACATACTGCTCAGTTCTCTCTGGTTATTTCTTTGGATTCCAACAAGGCTTATTGGTTATTTTCATAGCAGATCTGCTC
GCTTGTTGTTCTTGCTTCACCCTTTCCAGGAAGTTTGGCAGAACCGTAATTGAGAAACTCGTAGGCAAGAATCTGATGAA
TCGTGTTGAGAATTTCAGCAAAAAACATTTGGAGCAAAACTTTTTTTTAATGACAAGTTTTTTAATGTCGAATTTATTTG
ATTTTGTTTGTTATGGCTTAGGACTTACAAAAGTTAAATGGAAAAAGTTTTTACCTGCATTATTATTTAGCATCATAATA
TCAGATGCCCCATTTGTCGCAAGTGGATATGCACTAAAACGCCTCGGCGGCATTGAAATTCAAGAAATTATTAATGGGAA
TATAAAGGCACTCCAAGGACAACCTCTAACAATATTCATTGCCTCTATCACGTTAATATTTTCTCTGGCAATAATCAATA
TGGTCCTACAAAGAAGACAGGATAATATCAAAAGAACAGCCAATTAA

Upstream 100 bases:

>100_bases
AGGCATGTAAATGCTATATTTAGTTAGTTAAATCCAGTAGAAAGTGATCAGAATACATCTCAATCGAACGAAATGGTCTT
ATTTAATAATCAGCATTCTC

Downstream 100 bases:

>100_bases
TGATTATCTCTTAAAGAGAGCATCGTTACAATTGTTTCTTTCAGTGTCTCATTTCGAGACCATCAAGTCAGAACAAGTTT
AAGGCTCATTTATAGCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVALMIYIAQFLDVSTIGSWLKGIDGRVESIGLWAISIIFALRSISIIIPILPGTYCSVLSGYFFGFQQGLLVIFIADLL
ACCSCFTLSRKFGRTVIEKLVGKNLMNRVENFSKKHLEQNFFLMTSFLMSNLFDFVCYGLGLTKVKWKKFLPALLFSIII
SDAPFVASGYALKRLGGIEIQEIINGNIKALQGQPLTIFIASITLIFSLAIINMVLQRRQDNIKRTAN

Sequences:

>Translated_228_residues
MVALMIYIAQFLDVSTIGSWLKGIDGRVESIGLWAISIIFALRSISIIIPILPGTYCSVLSGYFFGFQQGLLVIFIADLL
ACCSCFTLSRKFGRTVIEKLVGKNLMNRVENFSKKHLEQNFFLMTSFLMSNLFDFVCYGLGLTKVKWKKFLPALLFSIII
SDAPFVASGYALKRLGGIEIQEIINGNIKALQGQPLTIFIASITLIFSLAIINMVLQRRQDNIKRTAN
>Mature_228_residues
MVALMIYIAQFLDVSTIGSWLKGIDGRVESIGLWAISIIFALRSISIIIPILPGTYCSVLSGYFFGFQQGLLVIFIADLL
ACCSCFTLSRKFGRTVIEKLVGKNLMNRVENFSKKHLEQNFFLMTSFLMSNLFDFVCYGLGLTKVKWKKFLPALLFSIII
SDAPFVASGYALKRLGGIEIQEIINGNIKALQGQPLTIFIASITLIFSLAIINMVLQRRQDNIKRTAN

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25481; Mature: 25481

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALMIYIAQFLDVSTIGSWLKGIDGRVESIGLWAISIIFALRSISIIIPILPGTYCSVL
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SGYFFGFQQGLLVIFIADLLACCSCFTLSRKFGRTVIEKLVGKNLMNRVENFSKKHLEQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLMTSFLMSNLFDFVCYGLGLTKVKWKKFLPALLFSIIISDAPFVASGYALKRLGGIEI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCCHH
QEIINGNIKALQGQPLTIFIASITLIFSLAIINMVLQRRQDNIKRTAN
HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVALMIYIAQFLDVSTIGSWLKGIDGRVESIGLWAISIIFALRSISIIIPILPGTYCSVL
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SGYFFGFQQGLLVIFIADLLACCSCFTLSRKFGRTVIEKLVGKNLMNRVENFSKKHLEQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLMTSFLMSNLFDFVCYGLGLTKVKWKKFLPALLFSIIISDAPFVASGYALKRLGGIEI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCCHH
QEIINGNIKALQGQPLTIFIASITLIFSLAIINMVLQRRQDNIKRTAN
HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA