| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is hisH [H]
Identifier: 124023715
GI number: 124023715
Start: 1774726
End: 1775382
Strand: Direct
Name: hisH [H]
Synonym: P9303_20151
Alternate gene names: 124023715
Gene position: 1774726-1775382 (Clockwise)
Preceding gene: 124023714
Following gene: 124023716
Centisome position: 66.16
GC content: 36.83
Gene sequence:
>657_bases ATGGCGCCCAAAATTCAAACTGTTATGAAGAGCTATAGTGATACTGTTGTTGTGATTGACTATGGAATGGGAAATATGTG GTCTGTAATTAGTGCATTAAAGTATTTAAAGATCGAATACATTGTTACAAGCGACCCATGCAAGGTTGAAATAGCTAAGA TACTTCTGCTGCCTGGGGTGGGATCATTCCGCAAAGGAATTGAATCGCTCATCGATTTGAATCTCATCGATCCTATTATT GAAGCGGTCACTATTAGAAAGGCAAAGATACTTGGAATCTGTTTGGGGTTTCAGCTGCTTGCGATTTCTAGTACAGAAGA TGGGTATACAAGCGGTCTCGGTGTAATACCAGGTATCGTAGAAAGATTCTCAGAAGGACAAGTAAACCCTATGAAGGTAC CTCATATAGGTTTTAGTACTATAAATATCAATAAAAAAGAAGGGCTCTTTGAAGGGTTTGATACAAATGCCGACTTTTAT TTTGTTCATTCATATAGAATATCACCATTATTAATAGCAGATAATTATGCAACATGTAAGTATGGTGAGAAGTTTCTTGC GGCCTACCATCATAAAAATGTCATGGGAACACAATTTCATCCTGAAAAAAGTCAAACAAACGGACTGGCACTAATCAACA ATTTCATGAAGATTTAA
Upstream 100 bases:
>100_bases CAGAGATGTATCTAGAGTACTTTGAAGTTAATCAAGAAGAGTTTGATCAGATCCTAGACCAATGGGCAAACAAAAAATTA TTTAACAAGATCAAGGGTAG
Downstream 100 bases:
>100_bases TCAATGCCTAAAAAACGAATAATATTTACACTTTTGTACGATAGTCAAAGCGAACATTTCTTGTTAAGCAGGAATTTTCG CGTGCAGGAAGTTGGAGATT
Product: imidazole glycerol phosphate synthase subunit HisH
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit 1; IGP synthase subunit hisH 1; ImGP synthase subunit hisH 1; IGPS subunit hisH 1 [H]
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MAPKIQTVMKSYSDTVVVIDYGMGNMWSVISALKYLKIEYIVTSDPCKVEIAKILLLPGVGSFRKGIESLIDLNLIDPII EAVTIRKAKILGICLGFQLLAISSTEDGYTSGLGVIPGIVERFSEGQVNPMKVPHIGFSTININKKEGLFEGFDTNADFY FVHSYRISPLLIADNYATCKYGEKFLAAYHHKNVMGTQFHPEKSQTNGLALINNFMKI
Sequences:
>Translated_218_residues MAPKIQTVMKSYSDTVVVIDYGMGNMWSVISALKYLKIEYIVTSDPCKVEIAKILLLPGVGSFRKGIESLIDLNLIDPII EAVTIRKAKILGICLGFQLLAISSTEDGYTSGLGVIPGIVERFSEGQVNPMKVPHIGFSTININKKEGLFEGFDTNADFY FVHSYRISPLLIADNYATCKYGEKFLAAYHHKNVMGTQFHPEKSQTNGLALINNFMKI >Mature_217_residues APKIQTVMKSYSDTVVVIDYGMGNMWSVISALKYLKIEYIVTSDPCKVEIAKILLLPGVGSFRKGIESLIDLNLIDPIIE AVTIRKAKILGICLGFQLLAISSTEDGYTSGLGVIPGIVERFSEGQVNPMKVPHIGFSTININKKEGLFEGFDTNADFYF VHSYRISPLLIADNYATCKYGEKFLAAYHHKNVMGTQFHPEKSQTNGLALINNFMKI
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=206, Percent_Identity=37.378640776699, Blast_Score=124, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6319725, Length=213, Percent_Identity=35.6807511737089, Blast_Score=105, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 24163; Mature: 24031
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPKIQTVMKSYSDTVVVIDYGMGNMWSVISALKYLKIEYIVTSDPCKVEIAKILLLPGV CCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHEEEEEEEECCCCEEEEEEEEEECCC GSFRKGIESLIDLNLIDPIIEAVTIRKAKILGICLGFQLLAISSTEDGYTSGLGVIPGIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCHHHHHH ERFSEGQVNPMKVPHIGFSTININKKEGLFEGFDTNADFYFVHSYRISPLLIADNYATCK HHHHCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCCCCCH YGEKFLAAYHHKNVMGTQFHPEKSQTNGLALINNFMKI HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure APKIQTVMKSYSDTVVVIDYGMGNMWSVISALKYLKIEYIVTSDPCKVEIAKILLLPGV CCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHEEEEEEEECCCCEEEEEEEEEECCC GSFRKGIESLIDLNLIDPIIEAVTIRKAKILGICLGFQLLAISSTEDGYTSGLGVIPGIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEEEEECCCCCCCCCCCHHHHHH ERFSEGQVNPMKVPHIGFSTININKKEGLFEGFDTNADFYFVHSYRISPLLIADNYATCK HHHHCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCCCCCH YGEKFLAAYHHKNVMGTQFHPEKSQTNGLALINNFMKI HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917641 [H]