| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023674
Identifier: 124023674
GI number: 124023674
Start: 1736543
End: 1736818
Strand: Direct
Name: 124023674
Synonym: P9303_19741
Alternate gene names: NA
Gene position: 1736543-1736818 (Clockwise)
Preceding gene: 124023673
Following gene: 124023681
Centisome position: 64.73
GC content: 55.43
Gene sequence:
>276_bases ATGAGCCCCAGCCTTGCCCCTGGCGACCTGGTGATCTTTCAACCGATCACCAGCGATGACAGGCGGCTCAAGGCTGGCTG TGTTGTGGTTGTCCGTCATCCGTTGCAACCAGCAACCCTGCTGATCAAACGCCTGATTGCAATCAACAATTCCGGACTGG AACTACGTGGTGACAACGAGCAAGCAAGCACAGACAGCCGGCATTTCGGTTTGGTGAATCGCGACAGCCTGATTGGCATC GCTGAATGCGTATGGCGTGTTCCCTTCAGCGCATAA
Upstream 100 bases:
>100_bases GCCAGTTAAGCCAACAAGCATGATGCCAACAGCGAACTGGCGTTCGCTGTTCCTGCTGCTTTCAGGTCTTCGTCGCCACG CTCGTGTCGATGGAGACTCA
Downstream 100 bases:
>100_bases GAGCCCAGCAGATTAGGCAATCAAAGAAGCTGAGGGGATGTTTTCTGCAACCAAAAGAAGCCCGTGATGATCGATAGCCC ACCGGTTGATCCCACCAGCA
Product: signal peptidase
Products: NA
Alternate protein names: Signal Peptidase I; Peptidase
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSPSLAPGDLVIFQPITSDDRRLKAGCVVVVRHPLQPATLLIKRLIAINNSGLELRGDNEQASTDSRHFGLVNRDSLIGI AECVWRVPFSA
Sequences:
>Translated_91_residues MSPSLAPGDLVIFQPITSDDRRLKAGCVVVVRHPLQPATLLIKRLIAINNSGLELRGDNEQASTDSRHFGLVNRDSLIGI AECVWRVPFSA >Mature_90_residues SPSLAPGDLVIFQPITSDDRRLKAGCVVVVRHPLQPATLLIKRLIAINNSGLELRGDNEQASTDSRHFGLVNRDSLIGIA ECVWRVPFSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9935; Mature: 9803
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSLAPGDLVIFQPITSDDRRLKAGCVVVVRHPLQPATLLIKRLIAINNSGLELRGDNE CCCCCCCCCEEEEECCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCC QASTDSRHFGLVNRDSLIGIAECVWRVPFSA CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure SPSLAPGDLVIFQPITSDDRRLKAGCVVVVRHPLQPATLLIKRLIAINNSGLELRGDNE CCCCCCCCEEEEECCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCC QASTDSRHFGLVNRDSLIGIAECVWRVPFSA CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA