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The map label for this gene is sodN [H]

Identifier: 124023673

GI number: 124023673

Start: 1735957

End: 1736451

Strand: Direct

Name: sodN [H]

Synonym: P9303_19731

Alternate gene names: 124023673

Gene position: 1735957-1736451 (Clockwise)

Preceding gene: 124023672

Following gene: 124023674

Centisome position: 64.71

GC content: 54.34

Gene sequence:

>495_bases
TTGGCTTTCTCTACCTGCCAGATGTTGCGCTCGGCACTTTCCACACTTCACAGCAACCTGCCGGCCTCTTCGGTCCAGGC
TCACTGTGATGGCCCTTGCGGCGTTTACGATCCCGCCTCGGCAAGAGGCTCAGCTGAAGCCGTCGTATCGATGACCAAAA
AGCTGCTCGAACTGCAGCCTCCCTCAGGCAACGATCCGTCTGCTTGGGCGGCTTACAACAACACCTTCTCCCGCTTCGTC
GCCATCAAGGAAGAACAAGCTCAGCAAACCAAGAACGAGCTACTGATCCTGTGGACGGATTATTTCAAGCCAGAGCATCT
GGCAACTTTCCCGAATCTGCATGACATCTTCTGGAAAGCGGCCAAGCTCTGCAGCGCCTGCAAGGTCAACATCGATCAAT
CCAAGGCAGATGAACTGATCAAAGCTGTGGAAGCCATTCACACGATGTTCTGGAAATCCAAGGGTCGCAATGACGCCTGG
GTGAGAGCCAGTTAA

Upstream 100 bases:

>100_bases
TTTTCGAAGTCGAACTACTTGGCATCAAATGATCTAAACGCTGAATAGAAAATCAAATCAAAAGCAAACCCAATTAGCAA
TCAGCCTGGGTAGGCTCAGT

Downstream 100 bases:

>100_bases
GCCAACAAGCATGATGCCAACAGCGAACTGGCGTTCGCTGTTCCTGCTGCTTTCAGGTCTTCGTCGCCACGCTCGTGTCG
ATGGAGACTCAATGAGCCCC

Product: nickel-containing superoxide dismutase precursor (NISOD)

Products: NA

Alternate protein names: NiSOD; Nickel-containing superoxide dismutase [H]

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MAFSTCQMLRSALSTLHSNLPASSVQAHCDGPCGVYDPASARGSAEAVVSMTKKLLELQPPSGNDPSAWAAYNNTFSRFV
AIKEEQAQQTKNELLILWTDYFKPEHLATFPNLHDIFWKAAKLCSACKVNIDQSKADELIKAVEAIHTMFWKSKGRNDAW
VRAS

Sequences:

>Translated_164_residues
MAFSTCQMLRSALSTLHSNLPASSVQAHCDGPCGVYDPASARGSAEAVVSMTKKLLELQPPSGNDPSAWAAYNNTFSRFV
AIKEEQAQQTKNELLILWTDYFKPEHLATFPNLHDIFWKAAKLCSACKVNIDQSKADELIKAVEAIHTMFWKSKGRNDAW
VRAS
>Mature_163_residues
AFSTCQMLRSALSTLHSNLPASSVQAHCDGPCGVYDPASARGSAEAVVSMTKKLLELQPPSGNDPSAWAAYNNTFSRFVA
IKEEQAQQTKNELLILWTDYFKPEHLATFPNLHDIFWKAAKLCSACKVNIDQSKADELIKAVEAIHTMFWKSKGRNDAWV
RAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nickel superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014123 [H]

Pfam domain/function: PF09055 Sod_Ni [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 18162; Mature: 18031

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSTCQMLRSALSTLHSNLPASSVQAHCDGPCGVYDPASARGSAEAVVSMTKKLLELQP
CCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PSGNDPSAWAAYNNTFSRFVAIKEEQAQQTKNELLILWTDYFKPEHLATFPNLHDIFWKA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCHHHHHHHH
AKLCSACKVNIDQSKADELIKAVEAIHTMFWKSKGRNDAWVRAS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
>Mature Secondary Structure 
AFSTCQMLRSALSTLHSNLPASSVQAHCDGPCGVYDPASARGSAEAVVSMTKKLLELQP
CHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PSGNDPSAWAAYNNTFSRFVAIKEEQAQQTKNELLILWTDYFKPEHLATFPNLHDIFWKA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHCCCHHHHHHHH
AKLCSACKVNIDQSKADELIKAVEAIHTMFWKSKGRNDAWVRAS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8836134 [H]