| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is yjeF [C]
Identifier: 124023661
GI number: 124023661
Start: 1725898
End: 1727499
Strand: Reverse
Name: yjeF [C]
Synonym: P9303_19611
Alternate gene names: 124023661
Gene position: 1727499-1725898 (Counterclockwise)
Preceding gene: 124023663
Following gene: 124023660
Centisome position: 64.39
GC content: 56.8
Gene sequence:
>1602_bases TTGTCCTGGCCCCCATCGAACGCTGATCATCTTTTGGTTACTGCTGCGCAGATGGCAGCTCTCGAGAAGGAGATGTTTTC CAGCGGCTTGCCGGTGGCTGCTTTGATGGAAAAAGTAGGCCAGGCGATGGCGGCTTGGTTTCGCCAACAGTCTGAGTTGT TGGCAGAGGGTGTGGTGGTGTTGGTGGGCCCTGGCCATAACGGTGGTGATGGATTGGTGGTGGCCAGGGAGTTGCATCTT GCAGGGGTGAAGGTCCAGCTCTGGGCGCCCTTGCCGATCCGTCAACCATTAACGGCCCAGCATTGGACTTACGTTAAATC GCTTGGCATTCAGCAACTAGATCAAGCTCCTGATGTAGCTGGTGAGTCTCTTTGGATCGAGGCTCTGTTTGGGCTCGGAC AATCTCGCCCACTCCCTGAAACGTTGGCAACGTTGTTGCAGGCGCGCCAGCGCTGCCAGCCAGGCAAGTTGGTGAGTTTG GATGTGCCTGCTGGGCTGTGTTCAGATTCCGGCATCCCTTTCCCAGGTGGGGCTGCCGTGGCGATGACGACGCTCACTGT GGGGTTGCTCAAGCAAGGCCTTATTCAGGATGCGGCGATCGATCATGTTGGCCGCCTGGTGCGGGTTGATATGGGCGTGC CGAAGATCTTGTTGAAGCAGTTGCCAAAGTCGCAACCTCGGCGGCTCTGTTCTGCGGATGTGGCCACCGTTCCCTGGCAG CATCCAGCAGCAGGCGCGATGAAATACGAACGAGGGCGGGTGTTGGTGATTGCTGGTAGTGATGATTACCCTGGGGCGGC TTTTCTGGCCATTCAGGGTGCTATCGCTAGCGGTGCAGGCAGCATTCAAGCCGCTGTGCCTGCTGCAGTAGCCGATCAGC TTTGGCAAGTGGCGCCTGAAGTTGTTTTGGCGGCCGCACTTGAGAGTTCTGCGGCAGGTGGCATGGCCTTAGCTACTTGG TTGGCGAGTCATGATCTCAGCCGGTTCGATGCCGTCTTGATTGGGCCAGGCTTAAGTCGAGGTGGAGAACCTTGGTCAGT GTTGGCAGAACCGTTGCAGCGCTTTGCAGGCTTGTTGGTTTTGGATGCTGATGGTCTGAATCGATTGGCGCTGGCTACTG ATGGATGGCAATGGTTACAGCAGCGCCAAGGGCATACCTGGCTTACTCCCCATGCCGGTGAGTTCAGGAGATTGTTTCCG CAGCTCAAAGCTCGGCAACCTCTCGATTCGGCTCTGGAAGCATCCCGGCTTTGTGGAGCAGCTGTGCTGCTCAAGGGAGC ACACAGTGTGGTTGCGGATCCGTCTGGTGCCGCCTGGCAGCTAGGAGAGACAGCAAGTTGGGTTGCTCGTACTGGGCTCG GGGATCTGTTGGCTGGTTATGCAGCTGGCTTGGGATCTATGGATGCTGCTAAGGCTCAGGCTTGCCATTGCCAGGGTGAG TCTTTGGCCGTAGTGGCGTTGCTTCATGCCGAGGCTGCACGTCGATGCCGTCAAGGCAGTTCAGCAAGGTCTATCGCTCA ATCCCTTGCAGAACTCACGATTAGCTTGCAATCAAATGAATGTGATCAAGGGCACGTCAAAGGGTATGAATGCAAACGAT AA
Upstream 100 bases:
>100_bases GCTGGTGTTCTAGACACATGCTTAAGGGGGGCTGGGATTGGCGGCTGCATAGGCGTTACCGCATTGATGTCTTCATAGTG AGGTCCCATGCGCTCCAGTC
Downstream 100 bases:
>100_bases ATACCTAATTATCTCGATTCCCCTGCATGAATCCGAAAGCTTTTTTAAAGCTGCAGGGTTTTGCTGAAATTTGTAGGAAA ATTTCCTTCCAAATAAATCA
Product: fused sugar kinase/uncharacterized domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MSWPPSNADHLLVTAAQMAALEKEMFSSGLPVAALMEKVGQAMAAWFRQQSELLAEGVVVLVGPGHNGGDGLVVARELHL AGVKVQLWAPLPIRQPLTAQHWTYVKSLGIQQLDQAPDVAGESLWIEALFGLGQSRPLPETLATLLQARQRCQPGKLVSL DVPAGLCSDSGIPFPGGAAVAMTTLTVGLLKQGLIQDAAIDHVGRLVRVDMGVPKILLKQLPKSQPRRLCSADVATVPWQ HPAAGAMKYERGRVLVIAGSDDYPGAAFLAIQGAIASGAGSIQAAVPAAVADQLWQVAPEVVLAAALESSAAGGMALATW LASHDLSRFDAVLIGPGLSRGGEPWSVLAEPLQRFAGLLVLDADGLNRLALATDGWQWLQQRQGHTWLTPHAGEFRRLFP QLKARQPLDSALEASRLCGAAVLLKGAHSVVADPSGAAWQLGETASWVARTGLGDLLAGYAAGLGSMDAAKAQACHCQGE SLAVVALLHAEAARRCRQGSSARSIAQSLAELTISLQSNECDQGHVKGYECKR
Sequences:
>Translated_533_residues MSWPPSNADHLLVTAAQMAALEKEMFSSGLPVAALMEKVGQAMAAWFRQQSELLAEGVVVLVGPGHNGGDGLVVARELHL AGVKVQLWAPLPIRQPLTAQHWTYVKSLGIQQLDQAPDVAGESLWIEALFGLGQSRPLPETLATLLQARQRCQPGKLVSL DVPAGLCSDSGIPFPGGAAVAMTTLTVGLLKQGLIQDAAIDHVGRLVRVDMGVPKILLKQLPKSQPRRLCSADVATVPWQ HPAAGAMKYERGRVLVIAGSDDYPGAAFLAIQGAIASGAGSIQAAVPAAVADQLWQVAPEVVLAAALESSAAGGMALATW LASHDLSRFDAVLIGPGLSRGGEPWSVLAEPLQRFAGLLVLDADGLNRLALATDGWQWLQQRQGHTWLTPHAGEFRRLFP QLKARQPLDSALEASRLCGAAVLLKGAHSVVADPSGAAWQLGETASWVARTGLGDLLAGYAAGLGSMDAAKAQACHCQGE SLAVVALLHAEAARRCRQGSSARSIAQSLAELTISLQSNECDQGHVKGYECKR >Mature_532_residues SWPPSNADHLLVTAAQMAALEKEMFSSGLPVAALMEKVGQAMAAWFRQQSELLAEGVVVLVGPGHNGGDGLVVARELHLA GVKVQLWAPLPIRQPLTAQHWTYVKSLGIQQLDQAPDVAGESLWIEALFGLGQSRPLPETLATLLQARQRCQPGKLVSLD VPAGLCSDSGIPFPGGAAVAMTTLTVGLLKQGLIQDAAIDHVGRLVRVDMGVPKILLKQLPKSQPRRLCSADVATVPWQH PAAGAMKYERGRVLVIAGSDDYPGAAFLAIQGAIASGAGSIQAAVPAAVADQLWQVAPEVVLAAALESSAAGGMALATWL ASHDLSRFDAVLIGPGLSRGGEPWSVLAEPLQRFAGLLVLDADGLNRLALATDGWQWLQQRQGHTWLTPHAGEFRRLFPQ LKARQPLDSALEASRLCGAAVLLKGAHSVVADPSGAAWQLGETASWVARTGLGDLLAGYAAGLGSMDAAKAQACHCQGES LAVVALLHAEAARRCRQGSSARSIAQSLAELTISLQSNECDQGHVKGYECKR
Specific function: Unknown
COG id: COG0062
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790609, Length=477, Percent_Identity=28.7211740041929, Blast_Score=109, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 - InterPro: IPR004443 [H]
Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]
EC number: NA
Molecular weight: Translated: 55971; Mature: 55840
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWPPSNADHLLVTAAQMAALEKEMFSSGLPVAALMEKVGQAMAAWFRQQSELLAEGVVV CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE LVGPGHNGGDGLVVARELHLAGVKVQLWAPLPIRQPLTAQHWTYVKSLGIQQLDQAPDVA EEECCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHCHHHHHCCCCCC GESLWIEALFGLGQSRPLPETLATLLQARQRCQPGKLVSLDVPAGLCSDSGIPFPGGAAV CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHH AMTTLTVGLLKQGLIQDAAIDHVGRLVRVDMGVPKILLKQLPKSQPRRLCSADVATVPWQ HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCHHHHHHHHCCCCCCCCC HPAAGAMKYERGRVLVIAGSDDYPGAAFLAIQGAIASGAGSIQAAVPAAVADQLWQVAPE CCCCCCCEECCCEEEEEECCCCCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHH VVLAAALESSAAGGMALATWLASHDLSRFDAVLIGPGLSRGGEPWSVLAEPLQRFAGLLV HHHHHHHHHCCCCCHHHHHHHHHCCHHHHCEEEECCCCCCCCCCHHHHHHHHHHHCCEEE LDADGLNRLALATDGWQWLQQRQGHTWLTPHAGEFRRLFPQLKARQPLDSALEASRLCGA ECCCCCCEEEEECCHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH AVLLKGAHSVVADPSGAAWQLGETASWVARTGLGDLLAGYAAGLGSMDAAKAQACHCQGE HHHHHCCHHHEECCCCCCEECCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCC SLAVVALLHAEAARRCRQGSSARSIAQSLAELTISLQSNECDQGHVKGYECKR CEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SWPPSNADHLLVTAAQMAALEKEMFSSGLPVAALMEKVGQAMAAWFRQQSELLAEGVVV CCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE LVGPGHNGGDGLVVARELHLAGVKVQLWAPLPIRQPLTAQHWTYVKSLGIQQLDQAPDVA EEECCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHCHHHHHCCCCCC GESLWIEALFGLGQSRPLPETLATLLQARQRCQPGKLVSLDVPAGLCSDSGIPFPGGAAV CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHH AMTTLTVGLLKQGLIQDAAIDHVGRLVRVDMGVPKILLKQLPKSQPRRLCSADVATVPWQ HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCHHHHHHHHCCCCCCCCC HPAAGAMKYERGRVLVIAGSDDYPGAAFLAIQGAIASGAGSIQAAVPAAVADQLWQVAPE CCCCCCCEECCCEEEEEECCCCCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHH VVLAAALESSAAGGMALATWLASHDLSRFDAVLIGPGLSRGGEPWSVLAEPLQRFAGLLV HHHHHHHHHCCCCCHHHHHHHHHCCHHHHCEEEECCCCCCCCCCHHHHHHHHHHHCCEEE LDADGLNRLALATDGWQWLQQRQGHTWLTPHAGEFRRLFPQLKARQPLDSALEASRLCGA ECCCCCCEEEEECCHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH AVLLKGAHSVVADPSGAAWQLGETASWVARTGLGDLLAGYAAGLGSMDAAKAQACHCQGE HHHHHCCHHHEECCCCCCEECCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCC SLAVVALLHAEAARRCRQGSSARSIAQSLAELTISLQSNECDQGHVKGYECKR CEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]