| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023645
Identifier: 124023645
GI number: 124023645
Start: 1710223
End: 1710657
Strand: Reverse
Name: 124023645
Synonym: P9303_19451
Alternate gene names: NA
Gene position: 1710657-1710223 (Counterclockwise)
Preceding gene: 124023646
Following gene: 124023644
Centisome position: 63.77
GC content: 55.17
Gene sequence:
>435_bases ATGAATTGCAGAAGCTTGTCTAGGTTGATTTCCTTTGTTCTTAGCTTTCTAGTGATGTTGTCCGGTCATCCTGATGTCGC GATTGCCGCTCGTCATGACCCTGATGGCGGCGATGACGTTGCTGTCGTCGAGCATCTGCGCATCAAGGTGCCGGCCCATG CACGGGAGGCTTGGCTCAAAGCTGAGCAGGGCAGTTGGGAACCCTGGCTCGCGAAGCAGAGTGGCTATCTGGGGCGGGAT ATTTTTTGGGACGCTGAACAGGAGGAGGGCATCTTGCTGATTCGTTGGGCCAGCAGAGAACAGTGGAAATCGATTCCACA GGCTGAGGTGGATGTGGTGCAGGCACGCTTTGAACAGCTGGCCCGTGAGGCCACAGGTCAGGCCAGTAGTCATCCTTTCT TGCTGCAATTTGAAGGCGAATTGGTGCCTCAGTGA
Upstream 100 bases:
>100_bases TGGGTGTGAAGGCCACCACCAATGAAGGGCTTGGACCGGAAGGTCGAGAGGAGGGGATGAGTAGTCAGGCAGTCGCACTG TTGCAGCAGATAGGCCTGAC
Downstream 100 bases:
>100_bases CTGAGCCGCAGGTACGGCTGGATCTACAGCGGCGGCAGCGGCTTGGCATGGTGGAGGCGATCTTTGGTGAACACAAGACC AGTGAACAGATCGCAGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MNCRSLSRLISFVLSFLVMLSGHPDVAIAARHDPDGGDDVAVVEHLRIKVPAHAREAWLKAEQGSWEPWLAKQSGYLGRD IFWDAEQEEGILLIRWASREQWKSIPQAEVDVVQARFEQLAREATGQASSHPFLLQFEGELVPQ
Sequences:
>Translated_144_residues MNCRSLSRLISFVLSFLVMLSGHPDVAIAARHDPDGGDDVAVVEHLRIKVPAHAREAWLKAEQGSWEPWLAKQSGYLGRD IFWDAEQEEGILLIRWASREQWKSIPQAEVDVVQARFEQLAREATGQASSHPFLLQFEGELVPQ >Mature_144_residues MNCRSLSRLISFVLSFLVMLSGHPDVAIAARHDPDGGDDVAVVEHLRIKVPAHAREAWLKAEQGSWEPWLAKQSGYLGRD IFWDAEQEEGILLIRWASREQWKSIPQAEVDVVQARFEQLAREATGQASSHPFLLQFEGELVPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16272; Mature: 16272
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCRSLSRLISFVLSFLVMLSGHPDVAIAARHDPDGGDDVAVVEHLRIKVPAHAREAWLK CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHEEHHEEEECCCHHHHHHHH AEQGSWEPWLAKQSGYLGRDIFWDAEQEEGILLIRWASREQWKSIPQAEVDVVQARFEQL CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHH AREATGQASSHPFLLQFEGELVPQ HHHHCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MNCRSLSRLISFVLSFLVMLSGHPDVAIAARHDPDGGDDVAVVEHLRIKVPAHAREAWLK CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHEEHHEEEECCCHHHHHHHH AEQGSWEPWLAKQSGYLGRDIFWDAEQEEGILLIRWASREQWKSIPQAEVDVVQARFEQL CCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHH AREATGQASSHPFLLQFEGELVPQ HHHHCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA