| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is yqaB [C]
Identifier: 124023596
GI number: 124023596
Start: 1657965
End: 1658642
Strand: Reverse
Name: yqaB [C]
Synonym: P9303_18961
Alternate gene names: 124023596
Gene position: 1658642-1657965 (Counterclockwise)
Preceding gene: 124023597
Following gene: 124023590
Centisome position: 61.83
GC content: 53.69
Gene sequence:
>678_bases ATGTCCTTTCCTGCGGCCTGCTTGTTTGATCTAGATGGAGTGTTGTTGGATACTGAACCTCTACATGCTCAGGCCTGGTC TCAAACAGCGGCTGTCTTTGCTACCAGTCTCAGTACAAGTCAGTTGTCGATGCTAAAAGGTCGGCGTCGTCTTGATTGTG CTCAGCTGGTCAACAACTGGTTGAACACCCCGGTAGGGATCGAACAGCTCTTAGCCGTGCGCCAGCCGATCGCAAAGCAC CTGCTCAGTCAGGCTAAAGCCATGCCTGGAGCAGAGGAACTGGTTCGCTGGTGCTACGACCACAGGCTGCCAATGGCCAT GGCCTCCAGTAGTACGGCAGATGCCGTGGCATTTAAAAGTACCCATCACAGCTGGCTTGCACTGATTAAGACTCGAGTTC TTGGCGATGATCTATCTCTTACAGCAGGCAAACCCGCTCCAGATCCTTATCTACTTGCCGCGCGGCGGCTGGCTGTCAAG CCGACTGCCTGTTGGGCATTGGAAGACTCTCAGGCCGGCACACAGGCAGCCCTAGCCGCAGGGTGTCATGTCTGGGTGCT GAGCGAAAATGAAGCCCACATCAATTGCGATGGCAAGTTTAAAGATGAGAATCCTCGTCAAATCGCTCAGTTAAAAACCG TTCTTGACCATCTCCAGCAGGCTTGGGATGCACTCTGA
Upstream 100 bases:
>100_bases CAACCTCCTGTTAAACCATTGACAACTTGCATCCAATCGAAAATAACTGAGCTGGATATTGAGTTTTAATCAAGTCAACC GAGAGGGTGCGCATTGGTTC
Downstream 100 bases:
>100_bases AAAGCTCAGTAGAGACGGCTTAAAACAAAATCAGGTAGTTCCATTAATGCACGCTGGCAAGGTGAATCTGGTAGCCAAGC GATGGCTTCACGAGATTCCC
Product: phosphatase/phosphohexomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSFPAACLFDLDGVLLDTEPLHAQAWSQTAAVFATSLSTSQLSMLKGRRRLDCAQLVNNWLNTPVGIEQLLAVRQPIAKH LLSQAKAMPGAEELVRWCYDHRLPMAMASSSTADAVAFKSTHHSWLALIKTRVLGDDLSLTAGKPAPDPYLLAARRLAVK PTACWALEDSQAGTQAALAAGCHVWVLSENEAHINCDGKFKDENPRQIAQLKTVLDHLQQAWDAL
Sequences:
>Translated_225_residues MSFPAACLFDLDGVLLDTEPLHAQAWSQTAAVFATSLSTSQLSMLKGRRRLDCAQLVNNWLNTPVGIEQLLAVRQPIAKH LLSQAKAMPGAEELVRWCYDHRLPMAMASSSTADAVAFKSTHHSWLALIKTRVLGDDLSLTAGKPAPDPYLLAARRLAVK PTACWALEDSQAGTQAALAAGCHVWVLSENEAHINCDGKFKDENPRQIAQLKTVLDHLQQAWDAL >Mature_224_residues SFPAACLFDLDGVLLDTEPLHAQAWSQTAAVFATSLSTSQLSMLKGRRRLDCAQLVNNWLNTPVGIEQLLAVRQPIAKHL LSQAKAMPGAEELVRWCYDHRLPMAMASSSTADAVAFKSTHHSWLALIKTRVLGDDLSLTAGKPAPDPYLLAARRLAVKP TACWALEDSQAGTQAALAAGCHVWVLSENEAHINCDGKFKDENPRQIAQLKTVLDHLQQAWDAL
Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=186, Percent_Identity=33.8709677419355, Blast_Score=114, Evalue=6e-26, Organism=Homo sapiens, GI207113149, Length=209, Percent_Identity=30.1435406698565, Blast_Score=100, Evalue=8e-22, Organism=Homo sapiens, GI296011028, Length=155, Percent_Identity=33.5483870967742, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI296011030, Length=186, Percent_Identity=27.9569892473118, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1789046, Length=178, Percent_Identity=30.8988764044944, Blast_Score=75, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17554716, Length=230, Percent_Identity=28.2608695652174, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI17137324, Length=187, Percent_Identity=33.1550802139037, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI116008157, Length=187, Percent_Identity=32.0855614973262, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI45550911, Length=187, Percent_Identity=28.3422459893048, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24559; Mature: 24428
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPAACLFDLDGVLLDTEPLHAQAWSQTAAVFATSLSTSQLSMLKGRRRLDCAQLVNNW CCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHH LNTPVGIEQLLAVRQPIAKHLLSQAKAMPGAEELVRWCYDHRLPMAMASSSTADAVAFKS CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHH THHSWLALIKTRVLGDDLSLTAGKPAPDPYLLAARRLAVKPTACWALEDSQAGTQAALAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHC GCHVWVLSENEAHINCDGKFKDENPRQIAQLKTVLDHLQQAWDAL CCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFPAACLFDLDGVLLDTEPLHAQAWSQTAAVFATSLSTSQLSMLKGRRRLDCAQLVNNW CCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHH LNTPVGIEQLLAVRQPIAKHLLSQAKAMPGAEELVRWCYDHRLPMAMASSSTADAVAFKS CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHH THHSWLALIKTRVLGDDLSLTAGKPAPDPYLLAARRLAVKPTACWALEDSQAGTQAALAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHC GCHVWVLSENEAHINCDGKFKDENPRQIAQLKTVLDHLQQAWDAL CCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]