Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is comB

Identifier: 124023591

GI number: 124023591

Start: 1653468

End: 1654199

Strand: Direct

Name: comB

Synonym: P9303_18911

Alternate gene names: 124023591

Gene position: 1653468-1654199 (Clockwise)

Preceding gene: 124023586

Following gene: 124023592

Centisome position: 61.64

GC content: 54.92

Gene sequence:

>732_bases
ATGCAGCTCGCTTATTTCCATGTGGCAGCGGATGTGCCTCAGGGGGCTGAGCCTGATGCGGCTGTCGTCATCGACGTTCT
CAGAGCCACCACCACCATCGCCTGGGCTTTAAACAACGGTGCCGAAGCTGTTGAAACCTTTGCTGATTTGGACCAACTGA
GGCAAAGCGCGGCTCAATGGCCGGAGTCTTCCCGTTTGATGCTTGGTGAGCGAGGCGGACAGCGCATTGAGGGATTTGAT
CTGGGGAATTCCCCCGTCGCTGTGGTGCCCGAGCAAGTGGCTGGCAAAAGACTATTTATGAGCACGACTAACGGCACGCG
CTCTTTGCAGCGAGTGCGTGGGGTTCAGCGTTTATTCACTTTGGCACTACCAAACCGCAGAGCTGTTGCAGACCACTTGT
TGATGGATCCACCTGAGCAACTTTGGATTGTTGGTAGTGGCTGGGAAGGGGCCTACTCCCTGGAGGATTCTTTGGCGGCC
GGAGCATTAGCCGATTTGCTATTGAATGCTGCCGCTGATGAGGCTTGTGTCGTGAACGACGAACTCACTGCTGCACTAGC
CCTTTGGCAGCAGTGGAAGCACGATCCAGAAGCCTGTCTTCGTCAAGCCAGCCATGGGCAACGCTTAATTGGGCTTGGCG
ATCACGATGCAGATTTCAGATGTTGTGCTGAATTGGATCGGCTTTCTGTGGTTCCTGTTCAGGTCAAACCCGGAGTCCTT
TGTGCCTCTTGA

Upstream 100 bases:

>100_bases
GTCTTGGGACGCAGGTCCGGGACGAAGCAGGGGCATGGTTGGTAAGACAGCCAGCAAAATGATCTAGTTACTGTGGCGCA
CGTCGTTCCCTATCGAGGCC

Downstream 100 bases:

>100_bases
AACCACACTGCGATCTAAAGTTTCGCTCTCTGTTTCAACCCTGTGACCGACTTTCTGGCAGCCGCTTTGCAGCTGACGAG
CACCTCGGAACCAGAGCTCA

Product: 2-phosphosulfolactate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQWPESSRLMLGERGGQRIEGFD
LGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFTLALPNRRAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAA
GALADLLLNAAADEACVVNDELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL
CAS

Sequences:

>Translated_243_residues
MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQWPESSRLMLGERGGQRIEGFD
LGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFTLALPNRRAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAA
GALADLLLNAAADEACVVNDELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL
CAS
>Mature_243_residues
MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQWPESSRLMLGERGGQRIEGFD
LGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFTLALPNRRAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAA
GALADLLLNAAADEACVVNDELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL
CAS

Specific function: Unknown

COG id: COG2045

COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COMB_PROM3 (A2CAX3)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001017898.1
- STRING:   A2CAX3
- GeneID:   4777960
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_18911
- eggNOG:   COG2045
- HOGENOM:   HBG633644
- OMA:   HDPEACL
- ProtClustDB:   PRK00886
- HAMAP:   MF_00490
- InterPro:   IPR005238
- InterPro:   IPR022995
- Gene3D:   G3DSA:3.90.1560.10

Pfam domain/function: PF04029 2-ph_phosp

EC number: =3.1.3.71

Molecular weight: Translated: 26204; Mature: 26204

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQW
CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCC
PESSRLMLGERGGQRIEGFDLGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFT
CCCCCEEEECCCCCEEECEECCCCCEEECCHHHCCCEEEEECCCCHHHHHHHHHHHHHHH
LALPNRRAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAAGALADLLLNAAADEACVVND
HHCCCCHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECH
ELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL
HHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCEE
CAS
ECC
>Mature Secondary Structure
MQLAYFHVAADVPQGAEPDAAVVIDVLRATTTIAWALNNGAEAVETFADLDQLRQSAAQW
CEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCC
PESSRLMLGERGGQRIEGFDLGNSPVAVVPEQVAGKRLFMSTTNGTRSLQRVRGVQRLFT
CCCCCEEEECCCCCEEECEECCCCCEEECCHHHCCCEEEEECCCCHHHHHHHHHHHHHHH
LALPNRRAVADHLLMDPPEQLWIVGSGWEGAYSLEDSLAAGALADLLLNAAADEACVVND
HHCCCCHHHHHHHHCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECH
ELTAALALWQQWKHDPEACLRQASHGQRLIGLGDHDADFRCCAELDRLSVVPVQVKPGVL
HHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCEE
CAS
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA