| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023577
Identifier: 124023577
GI number: 124023577
Start: 1638681
End: 1639904
Strand: Direct
Name: 124023577
Synonym: P9303_18771
Alternate gene names: NA
Gene position: 1638681-1639904 (Clockwise)
Preceding gene: 124023575
Following gene: 124023580
Centisome position: 61.08
GC content: 55.31
Gene sequence:
>1224_bases ATGACTCCCGAGAATCAAGCTATTGCAAGGCAAGTGAGTGCACATAAGACTGTCTCTTGGCTTGATCAAGAATGGCCTTG GTGGCCGCTGTTACCTCTCTATCCCTATGGTCAGCGCCGCACCCTGGTCCGGGAACTAATACCCAATCAGATCTGGAGTT TTGAACAACTCCAAGGCCTTTATTACGTCGCTGTGCCTGTCAGGCTCACCGTGGTGAAGGTGCCAGGTGGGTTGATGTTG TTCAATCCCCTTCCTCCTACTCCCGAGTTGCGTCGAGCTCTAGCTGATCTGGAGGCCACCCATGGCAATGTGGTCACGAT TGTGCTTCCCACCGCGTCTGGCCTAGAGCACAAACTGTCTCTACCGGCAATGGCACGAGCCTTCCCACAGGCAGAGGTAT GGGTTTGTCCTGGTCAGTGGAGTTTCCCAATTTCCTTGCCTTCATCTTGGCTAGGCATTCCAGCGCGCCGCACCAAGGTG TTGCAGGAGGACGGCTTCCCCCATCCGGACAGTTGTACTTGGCTCCCTTTAGGCCCCCTGGATTTGGGGCTTGGCCGTTT TGAAGAGGTGGCTTGTTTTCACCGAGCTTCCGGCGCTGTATTGGTAACAGATGCTCTAGTAGGGATCGAGGCAGAACCTC CAGCTCTGTTTGATCTAGACCCCACACCCCTGTTATTCCATGCCCGTGATCGGGGTGATCAACCCCTTGAGGATTCTCCA CAAGCGCGCCGCCGAGGATGGGCCCGTGTGGTGTTGTTCGCGACCTATCTGAAGCCAGGGCCGCTTGTGATACCTCCCCT GTTGGAAGTGCTGCGCAATGCCTTCAGGCCCGGAACACTTAGCCCTAAAGCCCATTTCGGCCTGTTTCCATTCGCTTGGC AGCCCGGTTGGGAAGCTGCAGCTCAGGAGCGTCTCGGAAAGAACGGCCCACTTCTACAAGTTGCACCAGTGTTGGAACGG CTCGTATTTCCAAGAGCGAAGGACGTCTTGTTGGAATGGTTGGATGAGATGCGGCGCCTGAAAGGGATGCGTTGGCTTGT GTCTGCTCACTTCAGCGACATCGTGGCCTTCAAGCCTCATCACGTTCGATCTTTAAGTGAATCTATTTCCAGACGCCCAT GGGCTATCAATCAAGCCAGCTGGAGCTTTCTAGGCAGCGTTGATCAACGCCTGCTCAGCCTTGGTGTGGTGCCGAAAGAT CCTCAGGCAGCCTTCAGAGATTGA
Upstream 100 bases:
>100_bases GCGTCATCCAGGGACAGATTGGCTTGCTCGCCTGTTCTATCTCTAGCTTGTCCCTAAAGCCAGTTGCACAAGATGTTCAC CACTTGCACAGACTGAGGAC
Downstream 100 bases:
>100_bases GATCGTCTGTGTCGACTGCCATCGCTTCATCTGAAAACAACGATTCTTCCAATTCCTTGCGTTGCTCCATCTGGCGCAAG AAATATCCAGTCATCATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTPENQAIARQVSAHKTVSWLDQEWPWWPLLPLYPYGQRRTLVRELIPNQIWSFEQLQGLYYVAVPVRLTVVKVPGGLML FNPLPPTPELRRALADLEATHGNVVTIVLPTASGLEHKLSLPAMARAFPQAEVWVCPGQWSFPISLPSSWLGIPARRTKV LQEDGFPHPDSCTWLPLGPLDLGLGRFEEVACFHRASGAVLVTDALVGIEAEPPALFDLDPTPLLFHARDRGDQPLEDSP QARRRGWARVVLFATYLKPGPLVIPPLLEVLRNAFRPGTLSPKAHFGLFPFAWQPGWEAAAQERLGKNGPLLQVAPVLER LVFPRAKDVLLEWLDEMRRLKGMRWLVSAHFSDIVAFKPHHVRSLSESISRRPWAINQASWSFLGSVDQRLLSLGVVPKD PQAAFRD
Sequences:
>Translated_407_residues MTPENQAIARQVSAHKTVSWLDQEWPWWPLLPLYPYGQRRTLVRELIPNQIWSFEQLQGLYYVAVPVRLTVVKVPGGLML FNPLPPTPELRRALADLEATHGNVVTIVLPTASGLEHKLSLPAMARAFPQAEVWVCPGQWSFPISLPSSWLGIPARRTKV LQEDGFPHPDSCTWLPLGPLDLGLGRFEEVACFHRASGAVLVTDALVGIEAEPPALFDLDPTPLLFHARDRGDQPLEDSP QARRRGWARVVLFATYLKPGPLVIPPLLEVLRNAFRPGTLSPKAHFGLFPFAWQPGWEAAAQERLGKNGPLLQVAPVLER LVFPRAKDVLLEWLDEMRRLKGMRWLVSAHFSDIVAFKPHHVRSLSESISRRPWAINQASWSFLGSVDQRLLSLGVVPKD PQAAFRD >Mature_406_residues TPENQAIARQVSAHKTVSWLDQEWPWWPLLPLYPYGQRRTLVRELIPNQIWSFEQLQGLYYVAVPVRLTVVKVPGGLMLF NPLPPTPELRRALADLEATHGNVVTIVLPTASGLEHKLSLPAMARAFPQAEVWVCPGQWSFPISLPSSWLGIPARRTKVL QEDGFPHPDSCTWLPLGPLDLGLGRFEEVACFHRASGAVLVTDALVGIEAEPPALFDLDPTPLLFHARDRGDQPLEDSPQ ARRRGWARVVLFATYLKPGPLVIPPLLEVLRNAFRPGTLSPKAHFGLFPFAWQPGWEAAAQERLGKNGPLLQVAPVLERL VFPRAKDVLLEWLDEMRRLKGMRWLVSAHFSDIVAFKPHHVRSLSESISRRPWAINQASWSFLGSVDQRLLSLGVVPKDP QAAFRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45685; Mature: 45554
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPENQAIARQVSAHKTVSWLDQEWPWWPLLPLYPYGQRRTLVRELIPNQIWSFEQLQGL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCE YYVAVPVRLTVVKVPGGLMLFNPLPPTPELRRALADLEATHGNVVTIVLPTASGLEHKLS EEEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCC LPAMARAFPQAEVWVCPGQWSFPISLPSSWLGIPARRTKVLQEDGFPHPDSCTWLPLGPL CCHHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCEEEECCHH DLGLGRFEEVACFHRASGAVLVTDALVGIEAEPPALFDLDPTPLLFHARDRGDQPLEDSP HHCCCHHHHHHHHHHCCCCEEEEEHEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCC QARRRGWARVVLFATYLKPGPLVIPPLLEVLRNAFRPGTLSPKAHFGLFPFAWQPGWEAA HHHHCCHHEEEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH AQERLGKNGPLLQVAPVLERLVFPRAKDVLLEWLDEMRRLKGMRWLVSAHFSDIVAFKPH HHHHCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCH HVRSLSESISRRPWAINQASWSFLGSVDQRLLSLGVVPKDPQAAFRD HHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCHHHCCC >Mature Secondary Structure TPENQAIARQVSAHKTVSWLDQEWPWWPLLPLYPYGQRRTLVRELIPNQIWSFEQLQGL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCE YYVAVPVRLTVVKVPGGLMLFNPLPPTPELRRALADLEATHGNVVTIVLPTASGLEHKLS EEEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCC LPAMARAFPQAEVWVCPGQWSFPISLPSSWLGIPARRTKVLQEDGFPHPDSCTWLPLGPL CCHHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCEEEECCHH DLGLGRFEEVACFHRASGAVLVTDALVGIEAEPPALFDLDPTPLLFHARDRGDQPLEDSP HHCCCHHHHHHHHHHCCCCEEEEEHEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCC QARRRGWARVVLFATYLKPGPLVIPPLLEVLRNAFRPGTLSPKAHFGLFPFAWQPGWEAA HHHHCCHHEEEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH AQERLGKNGPLLQVAPVLERLVFPRAKDVLLEWLDEMRRLKGMRWLVSAHFSDIVAFKPH HHHHCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCH HVRSLSESISRRPWAINQASWSFLGSVDQRLLSLGVVPKDPQAAFRD HHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA