| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023566
Identifier: 124023566
GI number: 124023566
Start: 1627263
End: 1627865
Strand: Reverse
Name: 124023566
Synonym: P9303_18661
Alternate gene names: NA
Gene position: 1627865-1627263 (Counterclockwise)
Preceding gene: 124023576
Following gene: 124023565
Centisome position: 60.68
GC content: 56.22
Gene sequence:
>603_bases ATGACTGATTCTTACAGCGATCCACAACGACAAGAAAGGCATGGTGATGGTGCTCGGGAGAGCGGAAGGGCTGGATTCCG AGGTGGGCGCGGTCCTGGGAACCGTGAAGCCGGCGGATTTCGTATCCGTTTGAGCGACAACGAAATGCGCTCTGCCAGAG CCCTGCAGGACGCCTTTCAACTGCGCTCCACAGTGGCCGTGCTGGGATTTGCCCTGCGTACCCTTGGCCAGATGTTGGAG GATGGCCAATTAGACGAACTGGTGGCCAGTGAACGTTCCAAGGCCCCAAGTGGTGGCAGACGAAGAGAAGAAGGAGCTCA GCGAACGCGTAGTGATCGCTCTCATAAAGACAGACAGCTAACGCACCGAGGGGCTCGACCTGATCCCTTTGCACGGCCAG CCAAGCCTCAACCATCGGTTCAAGAGCCCGAGAAGGCTCTAGAAAGTGAGCAAAACCGCGCTGAAGAACAAACTCAGGAA CAGGCCCAGACTGCTGAAAGCGAACAATTGCACTCAGCAGAGCAAGAGCAGGACCAGGCTGCTGAAACTGAACAAGTGCA GGCTATAGAGCATGAACCTGAGAATGCACCTAGTGAGGGCTGA
Upstream 100 bases:
>100_bases TCTGATGAAGATCAAAAAAATTTAATCCCGTCATGAGCCCCAGGCATGTCGCGAAAGACGACGATGCGTCACACTTGCGC CTGATTGCAGGCCGTAGGCC
Downstream 100 bases:
>100_bases TTAATGCAGCGCCCGCGGGTCCTTTCCGGCGTCCAGCCGACAGGTGCCCTCCATCTGGGTAACTGGTTGGGGGCCATCCG CAACTGGGTAGATCTTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTDSYSDPQRQERHGDGARESGRAGFRGGRGPGNREAGGFRIRLSDNEMRSARALQDAFQLRSTVAVLGFALRTLGQMLE DGQLDELVASERSKAPSGGRRREEGAQRTRSDRSHKDRQLTHRGARPDPFARPAKPQPSVQEPEKALESEQNRAEEQTQE QAQTAESEQLHSAEQEQDQAAETEQVQAIEHEPENAPSEG
Sequences:
>Translated_200_residues MTDSYSDPQRQERHGDGARESGRAGFRGGRGPGNREAGGFRIRLSDNEMRSARALQDAFQLRSTVAVLGFALRTLGQMLE DGQLDELVASERSKAPSGGRRREEGAQRTRSDRSHKDRQLTHRGARPDPFARPAKPQPSVQEPEKALESEQNRAEEQTQE QAQTAESEQLHSAEQEQDQAAETEQVQAIEHEPENAPSEG >Mature_199_residues TDSYSDPQRQERHGDGARESGRAGFRGGRGPGNREAGGFRIRLSDNEMRSARALQDAFQLRSTVAVLGFALRTLGQMLED GQLDELVASERSKAPSGGRRREEGAQRTRSDRSHKDRQLTHRGARPDPFARPAKPQPSVQEPEKALESEQNRAEEQTQEQ AQTAESEQLHSAEQEQDQAAETEQVQAIEHEPENAPSEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22196; Mature: 22065
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSYSDPQRQERHGDGARESGRAGFRGGRGPGNREAGGFRIRLSDNEMRSARALQDAFQ CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH LRSTVAVLGFALRTLGQMLEDGQLDELVASERSKAPSGGRRREEGAQRTRSDRSHKDRQL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH THRGARPDPFARPAKPQPSVQEPEKALESEQNRAEEQTQEQAQTAESEQLHSAEQEQDQA HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AETEQVQAIEHEPENAPSEG HHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TDSYSDPQRQERHGDGARESGRAGFRGGRGPGNREAGGFRIRLSDNEMRSARALQDAFQ CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH LRSTVAVLGFALRTLGQMLEDGQLDELVASERSKAPSGGRRREEGAQRTRSDRSHKDRQL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH THRGARPDPFARPAKPQPSVQEPEKALESEQNRAEEQTQEQAQTAESEQLHSAEQEQDQA HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AETEQVQAIEHEPENAPSEG HHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA