| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023461
Identifier: 124023461
GI number: 124023461
Start: 1538708
End: 1539391
Strand: Reverse
Name: 124023461
Synonym: P9303_17611
Alternate gene names: NA
Gene position: 1539391-1538708 (Counterclockwise)
Preceding gene: 124023464
Following gene: 124023460
Centisome position: 57.38
GC content: 51.75
Gene sequence:
>684_bases ATGGGCATCAAGCTGGCCATCAGTGGAGCCTCTGGCAAAACCGGCTATCGAGTTGCCGAGGAAGCCCTAAAGGAAGGGAA TCAGGTGCGCCTGTTGCTTCGTCCAAACTCCCTTTTGCCAGATAATTTGAGCCAATGCGATCTACGGCGCTTGTCATTGG CAGATGAAACAGCCCTCGATGAAGCACTTGAAGGCTGCGACGCGCTTGTGCTCGCAACAGGTGCCAGACCCTCGGCAGAT CTAACCGGCCCTGCGCGGGTGGATGCTTTAGGGGTAAGACAGCAAATCGCCAGTTGCAAAAGGGTTGGCGTCAAAAGGGT TGTTCTGGTTAGTTCGCTTTGTGCTGGACGATGGTTGCATCCACTCAACCTTTTTGGCTTGATTTTGGTTTGGAAACGCC TAGGAGAACAGGCACTTGAGCAAAGCGGTCTCGATTGGACTGTGATCAGACCGGGTGGCCTGAACGATCGAGAAGAGAAC CTAGAGAAAGAAGGGATCCTTTATACAGGGGCCGATTGTCAGGAAGACGCTAGAATTCCACGACGATTAGTTGCGCGTTG CTGTATTGAAGCCCTCAAGACTCCCTCGTCAATTGGCCGCATTATTGAGGTCACGAGTGACCCTGATCTGAAGCGAATCA CAATGCAACAAGCACTTAAAAATATCAATGCTCTGGCGTCATAG
Upstream 100 bases:
>100_bases CAAGGTAAAAATCCAAGCGTTTTAAAGCTAGAGCATTGATCAAACAACAGCGTTCTATATATATTTTCGCTAGACCTTGT GCAATCTTCAGCAAATCGAC
Downstream 100 bases:
>100_bases TGTCATTAGATGAGGAGTGTCTGGTCATGAACACCAATGCCAAAATTGATGCCTTACAGCTGATGCTTACCGACCTGCGT ACTCGTAACGAACCCATTCG
Product: NADH-flavin reductase
Products: NA
Alternate protein names: NADH-Flavin Reductase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerase-Like; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGIKLAISGASGKTGYRVAEEALKEGNQVRLLLRPNSLLPDNLSQCDLRRLSLADETALDEALEGCDALVLATGARPSAD LTGPARVDALGVRQQIASCKRVGVKRVVLVSSLCAGRWLHPLNLFGLILVWKRLGEQALEQSGLDWTVIRPGGLNDREEN LEKEGILYTGADCQEDARIPRRLVARCCIEALKTPSSIGRIIEVTSDPDLKRITMQQALKNINALAS
Sequences:
>Translated_227_residues MGIKLAISGASGKTGYRVAEEALKEGNQVRLLLRPNSLLPDNLSQCDLRRLSLADETALDEALEGCDALVLATGARPSAD LTGPARVDALGVRQQIASCKRVGVKRVVLVSSLCAGRWLHPLNLFGLILVWKRLGEQALEQSGLDWTVIRPGGLNDREEN LEKEGILYTGADCQEDARIPRRLVARCCIEALKTPSSIGRIIEVTSDPDLKRITMQQALKNINALAS >Mature_226_residues GIKLAISGASGKTGYRVAEEALKEGNQVRLLLRPNSLLPDNLSQCDLRRLSLADETALDEALEGCDALVLATGARPSADL TGPARVDALGVRQQIASCKRVGVKRVVLVSSLCAGRWLHPLNLFGLILVWKRLGEQALEQSGLDWTVIRPGGLNDREENL EKEGILYTGADCQEDARIPRRLVARCCIEALKTPSSIGRIIEVTSDPDLKRITMQQALKNINALAS
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24618; Mature: 24487
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKLAISGASGKTGYRVAEEALKEGNQVRLLLRPNSLLPDNLSQCDLRRLSLADETALD CCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH EALEGCDALVLATGARPSADLTGPARVDALGVRQQIASCKRVGVKRVVLVSSLCAGRWLH HHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLNLFGLILVWKRLGEQALEQSGLDWTVIRPGGLNDREENLEKEGILYTGADCQEDARIP HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCEEECCCCHHHHHHH RRLVARCCIEALKTPSSIGRIIEVTSDPDLKRITMQQALKNINALAS HHHHHHHHHHHHCCHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GIKLAISGASGKTGYRVAEEALKEGNQVRLLLRPNSLLPDNLSQCDLRRLSLADETALD CEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH EALEGCDALVLATGARPSADLTGPARVDALGVRQQIASCKRVGVKRVVLVSSLCAGRWLH HHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLNLFGLILVWKRLGEQALEQSGLDWTVIRPGGLNDREENLEKEGILYTGADCQEDARIP HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCEEECCCCHHHHHHH RRLVARCCIEALKTPSSIGRIIEVTSDPDLKRITMQQALKNINALAS HHHHHHHHHHHHCCHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA