| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is yqeG [H]
Identifier: 124023437
GI number: 124023437
Start: 1520289
End: 1520798
Strand: Reverse
Name: yqeG [H]
Synonym: P9303_17371
Alternate gene names: 124023437
Gene position: 1520798-1520289 (Counterclockwise)
Preceding gene: 124023438
Following gene: 124023436
Centisome position: 56.69
GC content: 54.12
Gene sequence:
>510_bases ATGAGCCAACACTGGCTTCAGCCAAACTGGGAACCCGGCTTGACCCTCCCCCATCTGCCGATCCAGCACTTGCTGGATCA GGGCCTGCAGGCCCTCATCCTTGACGTTGATCGCACCTTGCTGCCCGGGCGTGAGATTGAACTACCGCTATCCGTTACAA GCTGGGTTAAGGAAGCCCAACGCCATCTATTACTTCACCTCTTCAGCAACAATCCCTCTCGAAAACGTATCGGTTCGGTA GCTGAACAACTAGATCTCACTTTCACCTGCAGTGCAGCGAAACCTCGCAGAGCCAGACTGCGAAAGGTGCTCAATCAGCT CCAGTGCAAACCTACAGAGATCGCCATTGTGGGAGATCGAATCTTCACTGACGTGCTAGCCGGAAACCGTCTTGATCTCT ATACCGTTCTAGTTCGACCACTACGCGCCGATGGTTACCCCTGCAACAACACTCGAGTTCAGCGTCTTGAGCAAAAACTT GCCGCATGGCTAGGGGCCCCACAGACATGA
Upstream 100 bases:
>100_bases GCATGACCGACGGTCAAGCAAAGCTTGTAGAAGGAGAGGAATTCGATCAAATCCAGCCACGTATTGAAGTCGAGCTCGAA GATAGGGAGCTGTAGATCTG
Downstream 100 bases:
>100_bases GTCTGTGGGTGGTGAAGGTGGGAACCAGCCTGCTGAGAGGCAATGAGAAGCAATCCACCGCCGAAGTGATTGAGAGCTAC AGCGCCTGTCTTTCAGCAAG
Product: hydrolase of the HAD superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSQHWLQPNWEPGLTLPHLPIQHLLDQGLQALILDVDRTLLPGREIELPLSVTSWVKEAQRHLLLHLFSNNPSRKRIGSV AEQLDLTFTCSAAKPRRARLRKVLNQLQCKPTEIAIVGDRIFTDVLAGNRLDLYTVLVRPLRADGYPCNNTRVQRLEQKL AAWLGAPQT
Sequences:
>Translated_169_residues MSQHWLQPNWEPGLTLPHLPIQHLLDQGLQALILDVDRTLLPGREIELPLSVTSWVKEAQRHLLLHLFSNNPSRKRIGSV AEQLDLTFTCSAAKPRRARLRKVLNQLQCKPTEIAIVGDRIFTDVLAGNRLDLYTVLVRPLRADGYPCNNTRVQRLEQKL AAWLGAPQT >Mature_168_residues SQHWLQPNWEPGLTLPHLPIQHLLDQGLQALILDVDRTLLPGREIELPLSVTSWVKEAQRHLLLHLFSNNPSRKRIGSVA EQLDLTFTCSAAKPRRARLRKVLNQLQCKPTEIAIVGDRIFTDVLAGNRLDLYTVLVRPLRADGYPCNNTRVQRLEQKLA AWLGAPQT
Specific function: Unknown
COG id: COG2179
COG function: function code R; Predicted hydrolase of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006549 - InterPro: IPR010021 [H]
Pfam domain/function: PF09419 DUF2010 [H]
EC number: NA
Molecular weight: Translated: 19204; Mature: 19072
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHWLQPNWEPGLTLPHLPIQHLLDQGLQALILDVDRTLLPGREIELPLSVTSWVKEAQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHH RHLLLHLFSNNPSRKRIGSVAEQLDLTFTCSAAKPRRARLRKVLNQLQCKPTEIAIVGDR HHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECHH IFTDVLAGNRLDLYTVLVRPLRADGYPCNNTRVQRLEQKLAAWLGAPQT HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQHWLQPNWEPGLTLPHLPIQHLLDQGLQALILDVDRTLLPGREIELPLSVTSWVKEAQ CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHH RHLLLHLFSNNPSRKRIGSVAEQLDLTFTCSAAKPRRARLRKVLNQLQCKPTEIAIVGDR HHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECHH IFTDVLAGNRLDLYTVLVRPLRADGYPCNNTRVQRLEQKLAAWLGAPQT HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]